RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 ASXL3Q9C0F0 2248 aa-1.22□□□□□ -2.6
RNU6-238P-201ENST00000363313 TEP1Q99973 2627 aaKnown RBP-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 MYO5BQ9ULV0 1848 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 LOC110117498A0A087WWA1 95 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 A0A087WX48 190 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 TRGV5A0A0B4J1U4 118 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 TMEM250H0YL14 139 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 SERPINA7P05543 415 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 FGF4P08620 206 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 KRT16P08779 473 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 HMOX2P30519 316 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 RPL27AP46776 148 aaKnown RBP-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 GBX2P52951 348 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 MOGQ16653 247 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 ANKDD1AQ495B1 522 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 CEP55Q53EZ4 464 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 NXNL2Q5VZ03 156 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 CYP4Z1Q86W10 505 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 C12orf29Q8N999 325 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 C9orf72Q96LT7 481 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 OBSCN-AS1Q96MR7 158 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 FAM103A1Q9BTL3 118 aaKnown RBP-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 DEFB129Q9H1M3 183 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 CFL2Q9Y281 166 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 SMARCA4P51532 1647 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 NF1P21359 2839 aa-1.23□□□□□ -2.61
RNU6-238P-201ENST00000363313 LPAP08519 4548 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 IGHV2-26A0A0B4J1V2 119 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 A0A1W2PRD5 423 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 FCN3O75636 299 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 PTTG1O95997 202 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 OR5AL1P0C617 328 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 CD24P25063 80 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 IFNAR2P48551 515 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 ACTR3P61158 418 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 YWHAEP62258 255 aaKnown RBP-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 RASL11AQ6T310 242 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 NANOGNBQ7Z5D8 188 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 OR11H6Q8NGC7 330 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 CCL17Q92583 94 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 FGF13Q92913 245 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 CMTM5Q96DZ9 223 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 C20orf144Q9BQM9 153 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 CDCA4Q9BXL8 241 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 VCX3BQ9H321 246 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 TRABDQ9H4I3 376 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 C11orf1Q9H5F2 150 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 WDR55Q9H6Y2 383 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 C12orf4Q9NQ89 552 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 WDR90Q96KV7 1748 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 LRP1BQ9NZR2 4599 aa-1.24□□□□□ -2.61
RNU6-238P-201ENST00000363313 LAMA5O15230 3695 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 C19orf84I3L1E1 186 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 DFFAO00273 331 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 NDC80O14777 642 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 ALOX12BO75342 701 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 ZMPSTE24O75844 475 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 CA2P00918 260 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 RNASE3P12724 160 aaKnown RBP-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 ATP5IP56385 69 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 CLDN6P56747 220 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 FAM43BQ6ZT52 329 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 SETD3Q86TU7 594 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 OR52E5Q8NH55 327 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 ANGPTL6Q8NI99 470 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 OPALINQ96PE5 141 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 COA1Q9GZY4 146 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 ADA2Q9NZK5 511 aa-1.25□□□□□ -2.61
RNU6-238P-201ENST00000363313 DCHS2Q6V1P9 2916 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 TRAV8-3A0A0A6YYJ7 113 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 FAM240AA0A1B0GVK7 77 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 H3BN98 237 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 M0QXV9 152 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 GCGP01275 180 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 CRHBPP24387 322 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 XCL1P47992 114 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 ARHGAP11BQ3KRB8 267 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 SPINK9Q5DT21 86 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 KTN1-AS1Q86SY8 53 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 NELFCDQ8IXH7 590 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 ZNF565Q8N9K5 539 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 MIEN1Q9BRT3 115 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 SPTBN4Q9H254 2564 aa-1.26□□□□□ -2.61
RNU6-238P-201ENST00000363313 SETD2Q9BYW2 2564 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 CXCL11O14625 94 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 MT4P47944 62 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 RGS8P57771 180 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 LGALS9BQ3B8N2 356 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 Q5BKY6 102 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 BEX5Q5H9J7 111 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 CLEC20AQ6ZU45 233 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 C8orf31Q8N9H6 132 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 FNDC9Q8TBE3 224 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 SLC7A6Q92536 515 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 TAMM41Q96BW9 452 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 LINC01587Q99440 93 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 TSNAXQ99598 290 aaKnown RBP-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 FIS1Q9Y3D6 152 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 U3KQA8 63 aa-1.27□□□□□ -2.61
RNU6-238P-201ENST00000363313 ZNF292O60281 2723 aa-1.27□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms