RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ZNF586Q9NXT0 402 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 HPRT1P00492 218 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 GAPDHP04406 335 aaKnown RBP11.68□□□□□ -0.54
LDB3-202ENST00000361373 NRN1LQ496H8 165 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 SULT1A1P50225 295 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 SSTP61278 116 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 MRPL14Q6P1L8 145 aaKnown RBP11.68□□□□□ -0.54
LDB3-202ENST00000361373 LILRB1Q8NHL6 650 aaPredicted RBP11.68□□□□□ -0.54
LDB3-202ENST00000361373 TMUB1Q9BVT8 246 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 CHCHD2Q9Y6H1 151 aaPredicted RBP11.68□□□□□ -0.54
LDB3-202ENST00000361373 A0A1W2PRD5 423 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 A0A1W2PRF3 423 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 A0A1W2PRM7 423 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 ZNF205O95201 554 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 CLDN14O95500 239 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 RPS4XP62701 263 aaKnown RBP11.67□□□□□ -0.54
LDB3-202ENST00000361373 TMEM241Q24JQ0 296 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 ABHD14AQ9BUJ0 271 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 SLC35B3Q9H1N7 401 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 ZNF703Q9H7S9 590 aaPredicted RBP11.67□□□□□ -0.54
LDB3-202ENST00000361373 MANBALQ9NQG1 85 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 MRPL22Q9NWU5 206 aaKnown RBP11.67□□□□□ -0.54
LDB3-202ENST00000361373 HSF4Q9ULV5 492 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 SIRT4Q9Y6E7 314 aaPredicted RBP11.67□□□□□ -0.54
LDB3-202ENST00000361373 ARID1AO14497 2285 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 ZNF320A2RRD8 509 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 NPIPB9F8W1W9 429 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 ZNF658BQ4V348 819 aaPredicted RBP11.67□□□□□ -0.54
LDB3-202ENST00000361373 ITLN1Q8WWA0 313 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 TMEM54Q969K7 222 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 IMMP1LQ96LU5 166 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 A0A1W2PPQ1 181 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 SYNGR3O43761 229 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 RECKO95980 971 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 CD200R1LQ6Q8B3 271 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 TRBV5-7A0A0A0MS05 114 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 MMDQ15546 238 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 ZNF561Q8N587 486 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 NXF2Q9GZY0 626 aaKnown RBP11.67□□□□□ -0.54
LDB3-202ENST00000361373 ZDHHC11Q9H8X9 412 aa11.67□□□□□ -0.54
LDB3-202ENST00000361373 IGHV3OR15-7A0A075B7D8 119 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 LYZP61626 148 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 TIMM23BQ5SRD1 257 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 C1orf162Q8NEQ5 155 aaPredicted RBP11.66□□□□□ -0.54
LDB3-202ENST00000361373 SRXN1Q9BYN0 137 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 YTHDF2Q9Y5A9 579 aaKnown RBP11.66□□□□□ -0.54
LDB3-202ENST00000361373 RALGAPA2Q2PPJ7 1873 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 NPY1RP25929 384 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 GNG4P50150 75 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 C11orf91Q3C1V1 193 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 FAM206AQ9NX38 181 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 ZNF737O75373 536 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 AANATQ16613 207 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 RSPO4Q2I0M5 234 aaPredicted RBP11.66□□□□□ -0.54
LDB3-202ENST00000361373 PDPNQ86YL7 162 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 NECAP1Q8NC96 275 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 OR10A7Q8NGE5 316 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 LPAR5Q9H1C0 372 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 OPN1MWP04001 364 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 OPN1MW2P0DN77 364 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 OPN1MW3P0DN78 364 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 UBE2L3P68036 154 aaKnown RBP11.66□□□□□ -0.54
LDB3-202ENST00000361373 SIGLECL1Q8N7X8 197 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 MRGPRFQ96AM1 343 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 CCL13Q99616 98 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 ORM2P19652 201 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 EFNB2P52799 333 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 OR1L1Q8NH94 360 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 MS4A3Q96HJ5 214 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 MIOXQ9UGB7 285 aa11.66□□□□□ -0.54
LDB3-202ENST00000361373 LOC102723996A0A087X1L8 192 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 SEC14L6B5MCN3 397 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 B9A039 149 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 CLDN34H7C241 214 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 SFTA3P0C7M3 94 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 DYNLT3P51808 116 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 ATP1A1-AS1Q5TC04 95 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 ZNF788Q6ZQV5 615 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 OPN4Q9UHM6 478 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 MMP9P14780 707 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 KCNMB1Q16558 191 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 AMELYQ99218 206 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 MS4A7Q9GZW8 240 aaPredicted RBP11.65□□□□□ -0.54
LDB3-202ENST00000361373 WNT5BQ9H1J7 359 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 PLSCR3Q9NRY6 295 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 ATP6V1G2-DDX39BF2Z307 99 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 RAB5AP20339 215 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 PPP1CCP36873 323 aaKnown RBP11.65□□□□□ -0.54
LDB3-202ENST00000361373 KLF14Q8TD94 323 aaPredicted RBP11.65□□□□□ -0.54
LDB3-202ENST00000361373 MRPL24Q96A35 216 aaKnown RBP11.65□□□□□ -0.54
LDB3-202ENST00000361373 PPP1R3EQ9H7J1 279 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 MYOFQ9NZM1 2061 aa11.65□□□□□ -0.54
LDB3-202ENST00000361373 J3QR06 171 aa11.65□□□□□ -0.55
LDB3-202ENST00000361373 OR2H2O95918 312 aa11.65□□□□□ -0.55
LDB3-202ENST00000361373 PNRC1Q12796 327 aaPredicted RBP11.65□□□□□ -0.55
LDB3-202ENST00000361373 TMEM18Q96B42 140 aa11.65□□□□□ -0.55
LDB3-202ENST00000361373 PERPQ96FX8 193 aa11.65□□□□□ -0.55
LDB3-202ENST00000361373 PCGF1Q9BSM1 259 aa11.65□□□□□ -0.55
LDB3-202ENST00000361373 PLA2G10O15496 165 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 HBZP02008 142 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms