RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 ERVS71-1P61550 626 aa17.72■□□□□ 0.43
SMURF1-202ENST00000361368 PIGYQ3MUY2 71 aa17.72■□□□□ 0.43
SMURF1-202ENST00000361368 ADAMTS17Q8TE56 1095 aa17.72■□□□□ 0.43
SMURF1-202ENST00000361368 MIEN1Q9BRT3 115 aa17.72■□□□□ 0.43
SMURF1-202ENST00000361368 PARP11Q9NR21 331 aa17.72■□□□□ 0.43
SMURF1-202ENST00000361368 FAM209AQ5JX71 171 aa17.72■□□□□ 0.43
SMURF1-202ENST00000361368 GPX7Q96SL4 187 aaPredicted RBP17.72■□□□□ 0.43
SMURF1-202ENST00000361368 ZDHHC8Q9ULC8 765 aa17.72■□□□□ 0.43
SMURF1-202ENST00000361368 KIF13AQ9H1H9 1805 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 WNT9BO14905 357 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 KLF7O75840 302 aaPredicted RBP17.71■□□□□ 0.43
SMURF1-202ENST00000361368 IGHV4-34P06331 123 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 HOXB1P14653 301 aaPredicted RBP17.71■□□□□ 0.43
SMURF1-202ENST00000361368 MRGPRGQ86SM5 289 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 ITGB4P16144 1822 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 ELOA3CA0A087WX78 387 aaPredicted RBP17.71■□□□□ 0.43
SMURF1-202ENST00000361368 A0A1W2PQF6 199 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 HRKO00198 91 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 TCL1AP56279 114 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 CCL8P80075 99 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 SRSF9Q13242 221 aaKnown RBP eCLIP17.71■□□□□ 0.43
SMURF1-202ENST00000361368 PLPPR5Q32ZL2 321 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 LAMTOR1Q6IAA8 161 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 KLF9Q13886 244 aaPredicted RBP17.71■□□□□ 0.43
SMURF1-202ENST00000361368 OR4A5Q8NH83 315 aa17.71■□□□□ 0.43
SMURF1-202ENST00000361368 NXF2Q9GZY0 626 aaKnown RBP17.71■□□□□ 0.43
SMURF1-202ENST00000361368 ATXN7O15265 892 aaPredicted RBP17.71■□□□□ 0.42
SMURF1-202ENST00000361368 C19orf54Q5BKX5 351 aa17.71■□□□□ 0.42
SMURF1-202ENST00000361368 FOXB2Q5VYV0 432 aa17.71■□□□□ 0.42
SMURF1-202ENST00000361368 METTL26Q96S19 204 aa17.71■□□□□ 0.42
SMURF1-202ENST00000361368 ABHD1Q96SE0 405 aa17.71■□□□□ 0.42
SMURF1-202ENST00000361368 PTPRZ1P23471 2315 aaPredicted RBP17.71■□□□□ 0.42
SMURF1-202ENST00000361368 FOXS1O43638 330 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 USP54Q70EL1 1684 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 CTXND1A0A1B0GTU2 59 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 SPINK2P20155 84 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 RBM11P57052 281 aaKnown RBP17.7■□□□□ 0.42
SMURF1-202ENST00000361368 TMEM255AQ5JRV8 349 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 TMEM78Q5T7P6 136 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 DPPA3Q6W0C5 159 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 SCNM1Q9BWG6 230 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 PRDM14Q9GZV8 571 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 COLQQ9Y215 455 aaPredicted RBP17.7■□□□□ 0.42
SMURF1-202ENST00000361368 IGHV1-45A0A0A0MS14 117 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 HIST1H1BP16401 226 aaKnown RBP17.7■□□□□ 0.42
SMURF1-202ENST00000361368 CTSSP25774 331 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 EWSR1Q01844 656 aaKnown RBP eCLIP17.7■□□□□ 0.42
SMURF1-202ENST00000361368 NUP37Q8NFH4 326 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 OPN3Q9H1Y3 402 aaPredicted RBP17.7■□□□□ 0.42
SMURF1-202ENST00000361368 MED19A0JLT2 244 aaPredicted RBP17.7■□□□□ 0.42
SMURF1-202ENST00000361368 NPIPB6E9PJ23 425 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 CEACAM21Q3KPI0 293 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 ZNF343Q6P1L6 599 aa17.7■□□□□ 0.42
SMURF1-202ENST00000361368 DHRS7CA6NNS2 312 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 WNT2BQ93097 391 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 IL22RA2Q969J5 263 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 CISD1Q9NZ45 108 aaKnown RBP17.69■□□□□ 0.42
SMURF1-202ENST00000361368 UBE2L6O14933 153 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 PF4V1P10720 104 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 SEZ6L2Q6UXD5 910 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 NPIPB8E9PQR5 432 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 TTRP02766 147 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 TMEM204Q9BSN7 226 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 PAXXQ9BUH6 204 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 FAM74A7A6NL05 159 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 PSG2P11465 335 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 RAB9AP51151 201 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 TMEM251Q8N6I4 163 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 MRPL24Q96A35 216 aaKnown RBP17.69■□□□□ 0.42
SMURF1-202ENST00000361368 PTX4Q96A99 478 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 CCL13Q99616 98 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 REG1BP48304 166 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 TMEM50BP56557 158 aa17.69■□□□□ 0.42
SMURF1-202ENST00000361368 ZNF385AQ96PM9 386 aaKnown RBP17.69■□□□□ 0.42
SMURF1-202ENST00000361368 HOGA1Q86XE5 327 aa17.68■□□□□ 0.42
SMURF1-202ENST00000361368 SCMH1Q96GD3 660 aa17.68■□□□□ 0.42
SMURF1-202ENST00000361368 NEU3Q9UQ49 428 aa17.68■□□□□ 0.42
SMURF1-202ENST00000361368 LRP5O75197 1615 aa17.68■□□□□ 0.42
SMURF1-202ENST00000361368 A0A0U1RQV5 110 aa17.68■□□□□ 0.42
SMURF1-202ENST00000361368 NKX2-6A6NCS4 301 aa17.68■□□□□ 0.42
SMURF1-202ENST00000361368 VSIG8P0DPA2 414 aa17.68■□□□□ 0.42
SMURF1-202ENST00000361368 TM4SF20Q53R12 229 aa17.68■□□□□ 0.42
SMURF1-202ENST00000361368 DDB2Q92466 427 aa17.68■□□□□ 0.42
SMURF1-202ENST00000361368 A0A0J9YW62 118 aa17.68■□□□□ 0.42
SMURF1-202ENST00000361368 RAB33BQ9H082 229 aa17.68■□□□□ 0.42
SMURF1-202ENST00000361368 TTC3P53804 2025 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 APELAP0DMC3 54 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.67■□□□□ 0.42
SMURF1-202ENST00000361368 MUC15Q8N387 334 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 MRPL30Q8TCC3 161 aaKnown RBP17.67■□□□□ 0.42
SMURF1-202ENST00000361368 C16orf92Q96LL3 132 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 PAGE4O60829 102 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 AMMECR1LQ6DCA0 310 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 OR2V2Q96R30 315 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 DOCK1Q14185 1865 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 M0R3E3 92 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 FGF5P12034 268 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 SMIM12Q96EX1 92 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 LEUTXA8MZ59 168 aa17.67■□□□□ 0.42
SMURF1-202ENST00000361368 MMD2Q8IY49 270 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms