RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 GNB4Q9HAV0 340 aa16.43■□□□□ 0.22
CD47-202ENST00000361309 ERVK13-1Q9NX77 482 aa16.43■□□□□ 0.22
CD47-202ENST00000361309 IL36GQ9NZH8 169 aa16.43■□□□□ 0.22
CD47-202ENST00000361309 ORC6Q9Y5N6 252 aa16.43■□□□□ 0.22
CD47-202ENST00000361309 TXNL1O43396 289 aa16.42■□□□□ 0.22
CD47-202ENST00000361309 MT-ND4P03905 459 aa16.42■□□□□ 0.22
CD47-202ENST00000361309 CSTBP04080 98 aaKnown RBP16.42■□□□□ 0.22
CD47-202ENST00000361309 ALPLP05186 524 aa16.42■□□□□ 0.22
CD47-202ENST00000361309 OR8U8P0C7N1 319 aa16.42■□□□□ 0.22
CD47-202ENST00000361309 OR5H8P0DN80 308 aa16.42■□□□□ 0.22
CD47-202ENST00000361309 SLC2A2P11168 524 aaPredicted RBP16.42■□□□□ 0.22
CD47-202ENST00000361309 SERPINA2P20848 420 aa16.42■□□□□ 0.22
CD47-202ENST00000361309 GBX2P52951 348 aaPredicted RBP16.42■□□□□ 0.22
CD47-202ENST00000361309 KIAA0141Q14154 515 aaPredicted RBP16.42■□□□□ 0.22
CD47-202ENST00000361309 SLC25A48Q6ZT89 311 aaKnown RBP16.42■□□□□ 0.22
CD47-202ENST00000361309 NEK7Q8TDX7 302 aa16.42■□□□□ 0.22
CD47-202ENST00000361309 RGP1Q92546 391 aaPredicted RBP16.42■□□□□ 0.22
CD47-202ENST00000361309 UBE2E2Q96LR5 201 aa16.42■□□□□ 0.22
CD47-202ENST00000361309 ZNF107Q9UII5 783 aaPredicted RBP16.42■□□□□ 0.22
CD47-202ENST00000361309 ZNF580Q9UK33 172 aa16.42■□□□□ 0.22
CD47-202ENST00000361309 I3L521 148 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 AIPO00170 330 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 MYF6P23409 242 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 VHLP40337 213 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 GTF2A1P52655 376 aaPredicted RBP16.41■□□□□ 0.22
CD47-202ENST00000361309 ZNF134P52741 427 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 ZNF137PP52743 207 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 ZNF616Q08AN1 781 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 Q3ZCU0 254 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 TMEM65Q6PI78 240 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 ZNF497Q6ZNH5 498 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 OVCH2Q7RTZ1 564 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 LINC00596Q86U02 117 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 ZNF491Q8N8L2 437 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 ZNF439Q8NDP4 499 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 OR5B12Q96R08 314 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 AMBNQ9NP70 447 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 VSIG4Q9Y279 399 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 WSB1Q9Y6I7 421 aa16.41■□□□□ 0.22
CD47-202ENST00000361309 EI24O14681 340 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 FADS2O95864 444 aaKnown RBP16.4■□□□□ 0.22
CD47-202ENST00000361309 GABRB1P18505 474 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 PPIFP30405 207 aaKnown RBP16.4■□□□□ 0.22
CD47-202ENST00000361309 ZNF93P35789 620 aaPredicted RBP16.4■□□□□ 0.22
CD47-202ENST00000361309 GNB1P62873 340 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 RUNX1Q01196 453 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 MPV17LQ2QL34 196 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 CT45A1Q5HYN5 189 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 FAM27D1Q5T7N8 215 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 DDI2Q5TDH0 399 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 OR10V1Q8NGI7 309 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 CT45A3Q8NHU0 189 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 GPR148Q8TDV2 347 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 S100A13Q99584 98 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 CHCHD6Q9BRQ6 235 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 GNG12Q9UBI6 72 aa16.4■□□□□ 0.22
CD47-202ENST00000361309 A0A1W2PP11 408 aa16.39■□□□□ 0.21
CD47-202ENST00000361309 C12orf77C9JDV5 145 aa16.39■□□□□ 0.21
CD47-202ENST00000361309 G3V318 75 aa16.39■□□□□ 0.21
CD47-202ENST00000361309 CD2P06729 351 aa16.39■□□□□ 0.21
CD47-202ENST00000361309 MMDQ15546 238 aa16.39■□□□□ 0.21
CD47-202ENST00000361309 SYT6Q5T7P8 510 aaPredicted RBP16.39■□□□□ 0.21
CD47-202ENST00000361309 ZNF429Q86V71 674 aa16.39■□□□□ 0.21
CD47-202ENST00000361309 STX19Q8N4C7 294 aa16.39■□□□□ 0.21
CD47-202ENST00000361309 DCUN1D4Q92564 292 aa16.39■□□□□ 0.21
CD47-202ENST00000361309 ISYNA1Q9NPH2 558 aa16.39■□□□□ 0.21
CD47-202ENST00000361309 TMEM138Q9NPI0 162 aa16.39■□□□□ 0.21
CD47-202ENST00000361309 GAR1Q9NY12 217 aaKnown RBP16.39■□□□□ 0.21
CD47-202ENST00000361309 SPINT2O43291 252 aa16.38■□□□□ 0.21
CD47-202ENST00000361309 LYL1P12980 280 aa16.38■□□□□ 0.21
CD47-202ENST00000361309 LSAMPQ13449 338 aa16.38■□□□□ 0.21
CD47-202ENST00000361309 PRR18Q8N4B5 295 aa16.38■□□□□ 0.21
CD47-202ENST00000361309 OR52I1Q8NGK6 324 aa16.38■□□□□ 0.21
CD47-202ENST00000361309 TMEM106AQ96A25 262 aa16.38■□□□□ 0.21
CD47-202ENST00000361309 LYSTQ99698 3801 aa16.38■□□□□ 0.21
CD47-202ENST00000361309 PAK1IP1Q9NWT1 392 aaPredicted RBP16.38■□□□□ 0.21
CD47-202ENST00000361309 TRAPPC2LQ9UL33 140 aa16.38■□□□□ 0.21
CD47-202ENST00000361309 GMPPBQ9Y5P6 360 aa16.38■□□□□ 0.21
CD47-202ENST00000361309 OVOL1O14753 267 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 ATP6V0E1O15342 81 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 IGLV1-40P01703 118 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 FRMD6-AS1P0C7T7 363 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 BDKRB2P30411 391 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 PPP3R1P63098 170 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 RAB40BQ12829 278 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 SLC22A6Q4U2R8 563 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 XAF1Q6GPH4 301 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 OR4K15Q8NH41 348 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 OR1L1Q8NH94 360 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 PYDC1Q8WXC3 89 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 ORAI1Q96D31 301 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 OR51J1Q9H342 316 aa16.37■□□□□ 0.21
CD47-202ENST00000361309 EPPK1P58107 5090 aaKnown RBP16.37■□□□□ 0.21
CD47-202ENST00000361309 CSMD3Q7Z407 3707 aa16.36■□□□□ 0.21
CD47-202ENST00000361309 LANCL1O43813 399 aa16.36■□□□□ 0.21
CD47-202ENST00000361309 ZNF780AO75290 641 aaPredicted RBP16.36■□□□□ 0.21
CD47-202ENST00000361309 SAP30O75446 220 aa16.36■□□□□ 0.21
CD47-202ENST00000361309 HBZP02008 142 aa16.36■□□□□ 0.21
CD47-202ENST00000361309 GTF2F2P13984 249 aa16.36■□□□□ 0.21
CD47-202ENST00000361309 SPNP16150 400 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms