RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 KIR2DS4P43632 304 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 KIR2DS1Q14954 304 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 MPV17LQ2QL34 196 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 NMSQ5H8A3 153 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 RBMS3Q6XE24 437 aaKnown RBP10.59□□□□□ -0.71
UBA3-202ENST00000361055 TCTEX1D2Q8WW35 142 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 GTF3AQ92664 365 aaKnown RBP10.59□□□□□ -0.71
UBA3-202ENST00000361055 RIMS4Q9H426 269 aaPredicted RBP10.59□□□□□ -0.71
UBA3-202ENST00000361055 ZDHHC11Q9H8X9 412 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 KIAA1456Q9P272 454 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 KIAA1549Q9HCM3 1950 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 hCG_1809904A0A1W2PP81 198 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 A0A1W2PR64 198 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 A0A1W2PRV1 198 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 SLC22A20A6NK97 555 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 ADAM20O43506 726 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 OR2C1O95371 312 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 SCTP09683 121 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 BCL3P20749 454 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 PMP22Q01453 160 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 RNFT1Q5M7Z0 435 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 DPPA3Q6W0C5 159 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 ZNF818PQ6ZRF7 136 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 GAPTQ8N292 157 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 TMEM171Q8WVE6 324 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 LINC00470Q9BZP3 86 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 PRORYQ9H606 182 aa10.59□□□□□ -0.71
UBA3-202ENST00000361055 PUS1Q9Y606 427 aaKnown RBP eCLIP10.59□□□□□ -0.71
UBA3-202ENST00000361055 ANKRD11Q6UB99 2663 aaPredicted RBP10.58□□□□□ -0.72
UBA3-202ENST00000361055 BSNQ9UPA5 3926 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 IGKV3D-15A0A087WSY6 115 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 A0A087WWC5 75 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 A0A1W2PPE2 198 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 GPR37O15354 613 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 SRP19P09132 144 aaKnown RBP10.58□□□□□ -0.72
UBA3-202ENST00000361055 FAM87AP0C7U9 286 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 RPS23P62266 143 aaKnown RBP10.58□□□□□ -0.72
UBA3-202ENST00000361055 PRDX4Q13162 271 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 CEACAM21Q3KPI0 293 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 HEPN1Q6WQI6 88 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 MKXQ8IYA7 352 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 CMTM1Q8IZ96 169 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 OR5D13Q8NGL4 314 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 OR5C1Q8NGR4 320 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 PLPPR1Q8TBJ4 325 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 ABHD14AQ9BUJ0 271 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 ATP23Q9Y6H3 246 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 DNAJC13O75165 2243 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 SSSCA1O60232 199 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 HSPB1P04792 205 aaKnown RBP10.58□□□□□ -0.72
UBA3-202ENST00000361055 COX5BP10606 129 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 CBR1P16152 277 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 OMGP23515 440 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 DYNLT3P51808 116 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 IL24Q13007 206 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 SLC16A13Q7RTY0 426 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 ODF3L1Q8IXM7 274 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 SLAMF9Q96A28 289 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 MUCL1Q96DR8 90 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 MAGT1Q9H0U3 335 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 DEFB127Q9H1M4 99 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 GLRX2Q9NS18 164 aa10.58□□□□□ -0.72
UBA3-202ENST00000361055 ZNF407Q9C0G0 2248 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 H0Y980 276 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 H3BQ15 152 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 HSD17B6O14756 317 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 CHST1O43916 411 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 MRPL33O75394 65 aaKnown RBP10.57□□□□□ -0.72
UBA3-202ENST00000361055 TMEM50AO95807 157 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 HBE1P02100 147 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 FABP1P07148 127 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 OR8U8P0C7N1 319 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 SLC25A6P12236 298 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 HAAOP46952 286 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 RAB2AP61019 212 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 TLE4Q04727 773 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 OR8G1Q15617 311 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 ZNF506Q5JVG8 444 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 OR56B2PQ8NGI1 322 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 OR5A2Q8NGI9 324 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 RBMXL1Q96E39 390 aaKnown RBP10.57□□□□□ -0.72
UBA3-202ENST00000361055 ZNF71Q9NQZ8 489 aaPredicted RBP10.57□□□□□ -0.72
UBA3-202ENST00000361055 GSN-AS1Q9NRJ2 163 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 CCL28Q9NRJ3 127 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 NOSIPQ9Y314 301 aaKnown RBP10.57□□□□□ -0.72
UBA3-202ENST00000361055 RFNGQ9Y644 331 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 ARID1AO14497 2285 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 ATMQ13315 3056 aa10.57□□□□□ -0.72
UBA3-202ENST00000361055 TRBV6-6A0A0A6YYG2 114 aa10.56□□□□□ -0.72
UBA3-202ENST00000361055 TRGV5A0A0B4J1U4 118 aa10.56□□□□□ -0.72
UBA3-202ENST00000361055 TRAV1-1A0A0B4J248 108 aa10.56□□□□□ -0.72
UBA3-202ENST00000361055 IGKV1D-13A0A0B4J2D9 117 aa10.56□□□□□ -0.72
UBA3-202ENST00000361055 A0A1B0GV50 99 aa10.56□□□□□ -0.72
UBA3-202ENST00000361055 PGLYRP1O75594 196 aaPredicted RBP10.56□□□□□ -0.72
UBA3-202ENST00000361055 IGHG3P01860 377 aa10.56□□□□□ -0.72
UBA3-202ENST00000361055 IGKV1-13P0DP09 117 aa10.56□□□□□ -0.72
UBA3-202ENST00000361055 NQO2P16083 231 aa10.56□□□□□ -0.72
UBA3-202ENST00000361055 ARF1P84077 181 aaKnown RBP10.56□□□□□ -0.72
UBA3-202ENST00000361055 HERPUD1Q15011 391 aa10.56□□□□□ -0.72
UBA3-202ENST00000361055 RNPS1Q15287 305 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms