RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 OR5B21A6NL26 309 aa11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 GEMIN2O14893 280 aaKnown RBP11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 PDCD6O75340 191 aa11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 HOXB5P09067 269 aa11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 GPM6AP51674 278 aa11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 OR10AD1Q8NGE0 317 aa11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 STOML3Q8TAV4 291 aa11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 EGLN1Q9GZT9 426 aa11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 FGF23Q9GZV9 251 aaPredicted RBP11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 TOLLIPQ9H0E2 274 aa11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 METTL8Q9H825 291 aaKnown RBP11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 UQCC1Q9NVA1 299 aa11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 AK3Q9UIJ7 227 aa11.8□□□□□ -0.52
CSNK1E-201ENST00000359867 MYO18BQ8IUG5 2567 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 SPTBN1Q01082 2364 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 ZNF732B4DXR9 585 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 FAM157CP0CG43 387 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 FPR2P25090 351 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 HOXC12P31275 282 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 ECI1P42126 302 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 RAB32Q13637 225 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 P2RY6Q15077 328 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 PIGYQ3MUY2 71 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 BHLHA15Q7RTS1 189 aaPredicted RBP11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 PEG10Q86TG7 708 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 C17orf78Q8N4C9 275 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 SUCNR1Q9BXA5 334 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 ZNF701Q9NV72 531 aaPredicted RBP11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 CRIM1Q9NZV1 1036 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 AGFG2O95081 481 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 FUT3P21217 361 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 CCKARP32238 428 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 SUPT4H1P63272 117 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 SURF2Q15527 256 aaPredicted RBP11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 TMEM128Q5BJH2 165 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 ZNF561Q8N587 486 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 RNASE11Q8TAA1 199 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 S100PBPQ96BU1 408 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 SULT4A1Q9BR01 284 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 NMES1Q9C002 83 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 PARP12Q9H0J9 701 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 PRO1933Q9H354 126 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 OBP2BQ9NPH6 170 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 TMEM100Q9NV29 134 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 EHFQ9NZC4 300 aa11.79□□□□□ -0.52
CSNK1E-201ENST00000359867 NKX2-6A6NCS4 301 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 IFITM10A6NMD0 228 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 SMPD2O60906 423 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 YIF1AO95070 293 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 GLRA1P23415 457 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 IDH3GP51553 393 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 FGF12P61328 243 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 RPP30P78346 268 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 C22orf34Q6ZV56 151 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 ZNF573Q86YE8 665 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 OR13G1Q8NGZ3 307 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 UNKLQ9H9P5 680 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 JKAMPQ9P055 326 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 ANXA10Q9UJ72 324 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 COL12A1Q99715 3063 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 ZG16O60844 167 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 SFT2D2O95562 160 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 CHRNB4P30926 498 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 F2RL1P55085 397 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 PPP1CBP62140 327 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 GNG3P63215 75 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 RPL7L1Q6DKI1 246 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 MYPOPQ86VE0 399 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 WDR31Q8NA23 367 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 RHOFQ9HBH0 211 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 MMP26Q9NRE1 261 aa11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 ERRFI1Q9UJM3 462 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-201ENST00000359867 TRAPPC2LH3BP13 241 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 FBXO24O75426 580 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 KNG1P01042 644 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 IGKV3-15P01624 115 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 FCGR3AP08637 254 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 CELA3BP08861 270 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 SELEP16581 610 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 TUBG1P23258 451 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 LPAR6P43657 344 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 NPBWR2P48146 333 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 PJVKQ0ZLH3 352 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 C4orf17Q53FE4 359 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 AADACL3Q5VUY0 350 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 RTBDNQ9BSG5 229 aaPredicted RBP11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 PKIBQ9C010 78 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 PLK3Q9H4B4 646 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 TUBG2Q9NRH3 451 aa11.77□□□□□ -0.52
CSNK1E-201ENST00000359867 MED6O75586 246 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 RAC2P15153 192 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 BCL3P20749 454 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 DDTP30046 118 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 MPV17LQ2QL34 196 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 OR2T2Q6IF00 324 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 CLEC9AQ6UXN8 241 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 LINC00596Q86U02 117 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 NRIP2Q9BQI9 281 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 ATG101Q9BSB4 218 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 C2orf88Q9BSF0 95 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms