RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 NRASP01111 189 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 KRASP01116 189 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 SNRPCP09234 159 aaKnown RBP3.84□□□□□ -1.8
PTPN22-201ENST00000359785 OR5G3P0C626 314 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 HOXB4P17483 251 aaPredicted RBP3.84□□□□□ -1.8
PTPN22-201ENST00000359785 AMY2BP19961 511 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 IL11P20809 199 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 ANOS1P23352 680 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 IL3RAP26951 378 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 CEACAM8P31997 349 aaPredicted RBP3.84□□□□□ -1.8
PTPN22-201ENST00000359785 GNMTQ14749 295 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 CNN3Q15417 329 aaKnown RBP3.84□□□□□ -1.8
PTPN22-201ENST00000359785 FAM120AOSQ5T036 256 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 SZRD1Q7Z422 152 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 UEVLDQ8IX04 471 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF645Q8N7E2 425 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 NHLRC2Q8NBF2 726 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 TMEM234Q8WY98 164 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 SPSB2Q99619 263 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 SPOCK3Q9BQ16 436 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 LINC00470Q9BZP3 86 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 CAPN10Q9HC96 672 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 SPANXA1Q9NS26 97 aa3.84□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF701Q9NV72 531 aaPredicted RBP3.84□□□□□ -1.8
PTPN22-201ENST00000359785 A0A1B0GXF2 115 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 PRSS38A1L453 326 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 PDCD6O75340 191 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 HLA-HP01893 362 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 GPX1P07203 203 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 PMCHP20382 165 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 GALR1P47211 349 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 LSSP48449 732 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 EFNA3P52797 238 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 AKR1C2P52895 323 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 ERVS71-1P61550 626 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 MRPS34P82930 218 aaKnown RBP3.83□□□□□ -1.8
PTPN22-201ENST00000359785 AKR1C1Q04828 323 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 MRPL49Q13405 166 aaKnown RBP3.83□□□□□ -1.8
PTPN22-201ENST00000359785 GPM6BQ13491 265 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 POU2AF1Q16633 256 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 TCTEX1D4Q5JR98 221 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 NCR3LG1Q68D85 454 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 FIGLAQ6QHK4 219 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 COX15Q7KZN9 410 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 OLIG3Q7RTU3 272 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 MEX3DQ86XN8 651 aaKnown RBP3.83□□□□□ -1.8
PTPN22-201ENST00000359785 IL22RA1Q8N6P7 574 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 KLHDC1Q8N7A1 406 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 NFAM1Q8NET5 270 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-201ENST00000359785 OR52M1Q8NGK5 317 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 BADQ92934 168 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 TNFRSF14Q92956 283 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 PSMG3-AS1Q96PY0 264 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 PKIBQ9C010 78 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 OR51I2Q9H344 312 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 C7orf69Q9H7B7 122 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 TMEM74BQ9NUR3 256 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 LSM4Q9Y4Z0 139 aaKnown RBP3.83□□□□□ -1.8
PTPN22-201ENST00000359785 LIPGQ9Y5X9 500 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 H0YGG7 62 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 RBFOX2O43251 390 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTPN22-201ENST00000359785 SYNGR3O43761 229 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 SP9P0CG40 484 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 OPRK1P41145 380 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 PCP4P48539 62 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 RBM11P57052 281 aaKnown RBP3.83□□□□□ -1.8
PTPN22-201ENST00000359785 ARF3P61204 181 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-201ENST00000359785 ENDOGQ14249 297 aaKnown RBP3.83□□□□□ -1.8
PTPN22-201ENST00000359785 SHBQ15464 509 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 KISS1Q15726 138 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 TMEM30BQ3MIR4 351 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF343Q6P1L6 599 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 LHFPL4Q7Z7J7 247 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 RTN4IP1Q8WWV3 396 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-201ENST00000359785 C11orf40Q8WZ69 217 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 CMKLR1Q99788 373 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 C1QTNF5Q9BXJ0 243 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 GFRA4Q9GZZ7 299 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 TMEM133Q9H2Q1 129 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF286AQ9HBT8 521 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 MMP17Q9ULZ9 603 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 ZNF835Q9Y2P0 537 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 ATP23Q9Y6H3 246 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 IGKV1D-8A0A087WSZ0 117 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 NPIPA5A0A0B4J1W7 369 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 hCG_38984A0A1B0GV85 526 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 M0R036 132 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 SCDO00767 359 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 NME2P1O60361 137 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 ZIC3O60481 467 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 VAMP5O95183 116 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 OR9G9P0C7N8 305 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 MSR1P21757 451 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 TIMP3P35625 211 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 NKX2-1P43699 371 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-201ENST00000359785 PIGPP57054 158 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 CX3CL1P78423 397 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 TMEM95Q3KNT9 176 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 SCGB2B2Q4G0G5 96 aa3.83□□□□□ -1.8
PTPN22-201ENST00000359785 RNASE12Q5GAN4 147 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms