RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ARL11Q969Q4 196 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 SRRQ9GZT4 340 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 SIRPDQ9H106 197 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 GAL3ST2Q9H3Q3 398 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 CALYQ9NYX4 217 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 MTFP1Q9UDX5 166 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 RBMX2Q9Y388 322 aaKnown RBP10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 IGKV1D-8A0A087WSZ0 117 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 MEIS3P1A6NDR6 274 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 RBBP9O75884 186 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 SSTR5P35346 364 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 KRTAP1-1Q07627 177 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 PYDC2Q56P42 97 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 DCAF12L2Q5VW00 463 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 CLEC9AQ6UXN8 241 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 HEPN1Q6WQI6 88 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 GDPD1Q8N9F7 314 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 OR10A7Q8NGE5 316 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 RFESDQ8TAC1 157 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 MAFIPQ8WZ33 124 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 SDHCQ99643 169 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 ZNF286AQ9HBT8 521 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 RAB9BQ9NP90 201 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 ONECUT1Q9UBC0 465 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 KLK11Q9UBX7 282 aa10.18□□□□□ -0.78
NIF3L1-201ENST00000359683 hCG_1809904A0A1W2PP81 198 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 A0A1W2PPE2 198 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 A0A1W2PR64 198 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 A0A1W2PRV1 198 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 F2RL2O00254 374 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 SPINT2O43291 252 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 MMP23AO75900 390 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 HBZP02008 142 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 SCTP09683 121 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 GSTT2P0CG29 244 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 GSTT2BP0CG30 244 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 MMP9P14780 707 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 PRTN3P24158 256 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 KIR2DS4P43632 304 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 ERVFRD-1P60508 538 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 HLA-DRB3P79483 266 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 SSBP1Q04837 148 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 KIR2DS1Q14954 304 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 LYSMD2Q8IV50 215 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 BEST4Q8NFU0 473 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 OR4A4PQ8NGN8 299 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 OR1L1Q8NH94 360 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 SNAPC3Q92966 411 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 UNKLQ9H9P5 680 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 IDI2-AS1Q9NZ38 188 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 ANXA10Q9UJ72 324 aa10.17□□□□□ -0.78
NIF3L1-201ENST00000359683 FN1P02751 2386 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 J3QLI3 93 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 FABP7O15540 132 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 CD5LO43866 347 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 IGHV1-8P0DP01 117 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 OMGP23515 440 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 FPR2P25090 351 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 RCVRNP35243 200 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 GDNFP39905 211 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 LOXL3P58215 753 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 HTD2P86397 168 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 RNASE12Q5GAN4 147 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 METTL11BQ5VVY1 283 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 Q8N402 240 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 OR52M1Q8NGK5 317 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 UBALD1Q8TB05 177 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 GALMQ96C23 342 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 KIRREL1Q96J84 757 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 THAP7Q9BT49 309 aaPredicted RBP10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 TMPRSS13Q9BYE2 586 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 C7orf69Q9H7B7 122 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 METTL8Q9H825 291 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 IFT46Q9NQC8 304 aa10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 NSD1Q96L73 2696 aaPredicted RBP10.16□□□□□ -0.78
NIF3L1-201ENST00000359683 IGKV1-6A0A0C4DH72 117 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 LANCL1O43813 399 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 TOX4O94842 621 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 DIRAS3O95661 229 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 FCER2P06734 321 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 PPP5CP53041 499 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 ACTBP60709 375 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 ACTG1P63261 375 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 ZNF846Q147U1 533 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 HERPUD1Q15011 391 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 TMEM30BQ3MIR4 351 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 PRAMEF5Q5TYX0 476 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 OR52W1Q6IF63 320 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 FAHD2BQ6P2I3 314 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 PRR18Q8N4B5 295 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 TNFRSF14Q92956 283 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 FAHD2AQ96GK7 314 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 TBX15Q96SF7 602 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 CABLES2Q9BTV7 478 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 WDR12Q9GZL7 423 aaKnown RBP10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 ZNF107Q9UII5 783 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 AUP1Q9Y679 476 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 SESN1Q9Y6P5 492 aa10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 NIPBLQ6KC79 2804 aaeCLIP10.15□□□□□ -0.78
NIF3L1-201ENST00000359683 A0A087X0M5 115 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms