RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 TBC1D26Q86UD7 250 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 LRRC61Q9BV99 259 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 CACNA1AO00555 2505 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 PCNX2A6NKB5 2137 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 A0A1W2PPQ1 181 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 MFAP5Q13361 173 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 CARFQ8N187 725 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 ADPRHL1Q8NDY3 354 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 OR2T10Q8NGZ9 312 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 PLSCR2Q9NRY7 297 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 OR6C3Q9NZP0 311 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 CEP295Q9C0D2 2601 aa12.83□□□□□ -0.35
UBAP1-202ENST00000359544 MAP1LC3B2A6NCE7 125 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 H3BML4 177 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF41P51814 821 aaPredicted RBP12.83□□□□□ -0.36
UBAP1-202ENST00000359544 C17orf67Q0P5P2 114 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 TRIP6Q15654 476 aaKnown RBP12.83□□□□□ -0.36
UBAP1-202ENST00000359544 ARSJQ5FYB0 599 aaPredicted RBP12.83□□□□□ -0.36
UBAP1-202ENST00000359544 NMSQ5H8A3 153 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 CARD17Q5XLA6 110 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 IMMP2LQ96T52 175 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 MAP1LC3BQ9GZQ8 125 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 LRP4O75096 1905 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 C5orf63A6NC05 138 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 A6NNC1 897 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 HPRT1P00492 218 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 FGF8P55075 233 aaPredicted RBP12.83□□□□□ -0.36
UBAP1-202ENST00000359544 RPL23P62829 140 aaKnown RBP12.83□□□□□ -0.36
UBAP1-202ENST00000359544 KCNIP4Q6PIL6 250 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF441Q8N8Z8 693 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 OR1N1Q8NGS0 311 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 BTF3L4Q96K17 158 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 RBKSQ9H477 322 aa12.83□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF705FA8MVS1 300 aaPredicted RBP12.82□□□□□ -0.36
UBAP1-202ENST00000359544 HLA-HP01893 362 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF705DP0CH99 300 aaPredicted RBP12.82□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF705BP0CI00 300 aaPredicted RBP12.82□□□□□ -0.36
UBAP1-202ENST00000359544 RANP62826 216 aaKnown RBP12.82□□□□□ -0.36
UBAP1-202ENST00000359544 GNB2P62879 340 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 SERF2P84101 59 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF726P1Q15940 193 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 PLPPR1Q8TBJ4 325 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 DTD1Q8TEA8 209 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 DYRK2Q92630 601 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 C20orf144Q9BQM9 153 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 LPAR2Q9HBW0 351 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 F5H5K5 113 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF737O75373 536 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 MDH2P40926 338 aaKnown RBP12.82□□□□□ -0.36
UBAP1-202ENST00000359544 PAX9P55771 341 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 SPIN3Q5JUX0 258 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 CDCP2Q5VXM1 449 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 PINX1Q96BK5 328 aaKnown RBP12.82□□□□□ -0.36
UBAP1-202ENST00000359544 MIEN1Q9BRT3 115 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 RSG1Q9BU20 258 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 SOHLH2Q9NX45 425 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 RNF115Q9Y4L5 304 aa12.82□□□□□ -0.36
UBAP1-202ENST00000359544 TMEM250H0YL14 139 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 ANGPTL7O43827 346 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 GNRHRP30968 328 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 GUCA1AP43080 201 aaPredicted RBP12.81□□□□□ -0.36
UBAP1-202ENST00000359544 LCN2P80188 198 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 MEF2BQ02080 365 aaPredicted RBP12.81□□□□□ -0.36
UBAP1-202ENST00000359544 CNN3Q15417 329 aaKnown RBP12.81□□□□□ -0.36
UBAP1-202ENST00000359544 TMEM41BQ5BJD5 291 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 TMEM211Q6ICI0 200 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 GJC3Q8NFK1 279 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 IL22RA2Q969J5 263 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 MS4A10Q96PG2 267 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 TBX15Q96SF7 602 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 ASCL3Q9NQ33 180 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 PIGBOS1A0A0B4J2F0 54 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 SPRY1O43609 319 aaPredicted RBP12.81□□□□□ -0.36
UBAP1-202ENST00000359544 TRAF3IP2O43734 574 aaPredicted RBP12.81□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF883P0CG24 379 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 IRF2P14316 349 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 UCP1P25874 307 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 BRS3P32247 399 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF92Q03936 586 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 MYBPHQ13203 477 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 C20orf196Q8IYI0 205 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 ZCCHC14Q8WYQ9 949 aaKnown RBP12.81□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF385AQ96PM9 386 aaKnown RBP12.81□□□□□ -0.36
UBAP1-202ENST00000359544 RAB40CQ96S21 281 aa12.81□□□□□ -0.36
UBAP1-202ENST00000359544 LAMA5O15230 3695 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 LRRC3CA6NJW4 275 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 OR2J2O76002 312 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 FOXC1Q12948 553 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 MALLQ13021 153 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 ELOVL1Q9BW60 279 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 VSIRQ9H7M9 311 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF581Q9P0T4 197 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 CHD8Q9HCK8 2581 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 TLX3O43711 291 aaPredicted RBP12.8□□□□□ -0.36
UBAP1-202ENST00000359544 PDCD6O75340 191 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 TNFSF13O75888 250 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 FBXW4P57775 412 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 NSDHLQ15738 373 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 HIST3H3Q16695 136 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms