RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 GPR132Q9UNW8 380 aa11.54□□□□□ -0.56
PDLIM5-203ENST00000359265 LAMP3Q9UQV4 416 aa11.54□□□□□ -0.56
PDLIM5-203ENST00000359265 C14orf166Q9Y224 244 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-203ENST00000359265 MAB21L2Q9Y586 359 aa11.54□□□□□ -0.56
PDLIM5-203ENST00000359265 NPIPB11E5RHQ5 1161 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 BET1O15155 118 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 SIGLEC5O15389 551 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 SSNA1O43805 119 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 OR4E1P0C645 316 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 SSTR2P30874 369 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 GLIPR1P48060 266 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 HERPUD1Q15011 391 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 CD276Q5ZPR3 534 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 FAHD2BQ6P2I3 314 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 SLC25A42Q86VD7 318 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 ZNRF1Q8ND25 227 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 ZFAND1Q8TCF1 268 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 MOB3AQ96BX8 217 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 FAHD2AQ96GK7 314 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 KIRREL1Q96J84 757 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 CCL13Q99616 98 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 NEURL2Q9BR09 285 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 NCOR1P1Q9H4R4 102 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 TAF9BQ9HBM6 251 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 ZNF69Q9UC07 566 aa11.53□□□□□ -0.56
PDLIM5-203ENST00000359265 TRBV6-7A0A0A0MS04 114 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 TRAV39A0A0B4J263 110 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 ODAMA1E959 279 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 FAM172BPA6NC97 362 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 NDUFA2O43678 99 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 CCNKO75909 580 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 PPYP01298 95 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 CTSDP07339 412 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 ZNF728P0DKX0 622 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 AADACP22760 399 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 NFYAP23511 347 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 ERP29P30040 261 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 UCP3P55916 312 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 P2RX3P56373 397 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 FXYD4P59646 89 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 MRPS11P82912 194 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 FAM216BQ8N7L0 139 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 OR10J5Q8NHC4 309 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 SPATA3Q8NHX4 192 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 MRGPRDQ8TDS7 321 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 ZNF431Q8TF32 576 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 CAPSLQ8WWF8 208 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 IL1F10Q8WWZ1 152 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 TOMM40LQ969M1 308 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 LIME1Q9H400 295 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 PLEKHF2Q9H8W4 249 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 RAB9BQ9NP90 201 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 OPN4Q9UHM6 478 aa11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 HRNRQ86YZ3 2850 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-203ENST00000359265 CSPG4Q6UVK1 2322 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 IGKV1-6A0A0C4DH72 117 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 TMPRSS2O15393 492 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 ADAM20O43506 726 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 RP2O75695 350 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 TUSC2O75896 110 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 FSTL3O95633 263 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 SELLP14151 372 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 AKR1C4P17516 323 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 IL2RGP31785 369 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 EDDM3BP56851 147 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 BAMBIQ13145 260 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 LPCAT3Q6P1A2 487 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 LYG2Q86SG7 212 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 H1FOOQ8IZA3 346 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 SLC38A6Q8IZM9 456 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 PRR18Q8N4B5 295 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 TPRX1Q8N7U7 411 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 OR52B4Q8NGK2 314 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 GALMQ96C23 342 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 TMPRSS13Q9BYE2 586 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 C5orf66Q9H5L9 145 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 OR6C3Q9NZP0 311 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 SLC23A1Q9UHI7 598 aa11.51□□□□□ -0.57
PDLIM5-203ENST00000359265 C12orf77C9JDV5 145 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 SPINT2O43291 252 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 HSPA12AO43301 675 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 NDUFB3O43676 98 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 HLA-AP01891 365 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 HBZP02008 142 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 HNRNPCP07910 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 COL8A2P25067 703 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 DHRS2Q13268 280 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 FCN2Q15485 313 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 CR1LQ2VPA4 569 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 ABCA11PQ4W5N1 156 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 TMEM128Q5BJH2 165 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 C11orf88Q6PI97 169 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 C5orf24Q7Z6I8 188 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 MUC20Q8N307 709 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 ZNF565Q8N9K5 539 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 ADAD2Q8NCV1 583 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 OR13A1Q8NGR1 328 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 TIMD4Q96H15 378 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 CCL19Q99731 98 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 SLC25A10Q9UBX3 287 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms