RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MYO9BQ13459 2157 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 IFITM10A6NMD0 228 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 OR10J1P30954 320 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 KCNMB1Q16558 191 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 SSX8Q7RTT4 187 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 ARL6IP6Q8N6S5 226 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 CHAC2Q8WUX2 184 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 ZNF764Q96H86 408 aaPredicted RBP16.06■□□□□ 0.16
SHANK1-202ENST00000359082 RAB33BQ9H082 229 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 TMEM218A2RU14 115 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 CCL21O00585 134 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 NMUP48645 174 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 B4DEV8 164 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 M0QZK8 103 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 GGCTO75223 188 aaKnown RBP16.06■□□□□ 0.16
SHANK1-202ENST00000359082 RPLP1P05386 114 aaKnown RBP16.06■□□□□ 0.16
SHANK1-202ENST00000359082 RBM38Q9H0Z9 239 aaKnown RBP16.06■□□□□ 0.16
SHANK1-202ENST00000359082 MYO5AQ9Y4I1 1855 aaKnown RBP16.06■□□□□ 0.16
SHANK1-202ENST00000359082 STAG3L2P0CL84 134 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 ROM1Q03395 351 aa16.06■□□□□ 0.16
SHANK1-202ENST00000359082 J3QT63 122 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 KLF7O75840 302 aaPredicted RBP16.05■□□□□ 0.16
SHANK1-202ENST00000359082 HIST1H1BP16401 226 aaKnown RBP16.05■□□□□ 0.16
SHANK1-202ENST00000359082 H7C2G1 150 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 J3QR06 171 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 ZAR1Q86SH2 424 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 LINC00596Q86U02 117 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 ASB5Q8WWX0 329 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 SPAARA0A1B0GVQ0 90 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 GHITMQ9H3K2 345 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 MMP9P14780 707 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 VDAC1P21796 283 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 IZUMO4Q1ZYL8 232 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 PTX4Q96A99 478 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 PAXXQ9BUH6 204 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 PAM16Q9Y3D7 125 aa16.05■□□□□ 0.16
SHANK1-202ENST00000359082 TRAV8-7A0A075B6U6 113 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 OR1L8Q8NGR8 309 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 KLK13Q9UKR3 277 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 HILPDAQ9Y5L2 63 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 CGB1A6NKQ9 187 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 LIFP15018 202 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 GAB4Q2WGN9 574 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 HMGCLL1Q8TB92 370 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 ADAMTS17Q8TE56 1095 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 MIXL1Q9H2W2 232 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 IGKV3D-15A0A087WSY6 115 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 A0A1B0GU03 582 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 DHRS7CA6NNS2 312 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 IGKV3-15P01624 115 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 PGA4P0DJD7 388 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 PGA5P0DJD9 388 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 SMUG1Q53HV7 270 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 ARAP2Q8WZ64 1704 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 FAM216AQ8WUB2 273 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 ADAT3Q96EY9 351 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-202ENST00000359082 CDX2Q99626 313 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-202ENST00000359082 PARP11Q9NR21 331 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 URB1O60287 2271 aaKnown RBP16.04■□□□□ 0.16
SHANK1-202ENST00000359082 PATE3B3GLJ2 98 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 ZNF324O75467 553 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-202ENST00000359082 RCC1P18754 421 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-202ENST00000359082 KIR3DL2P43630 455 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 EFNB2P52799 333 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 TEX30Q5JUR7 227 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 RAB37Q96AX2 223 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 TTTY12Q9BZ98 90 aa16.04■□□□□ 0.16
SHANK1-202ENST00000359082 C21orf140B9A014 251 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 ZNF25P17030 456 aaPredicted RBP16.03■□□□□ 0.16
SHANK1-202ENST00000359082 BTF3P20290 206 aaKnown RBP16.03■□□□□ 0.16
SHANK1-202ENST00000359082 STPG2Q8N412 459 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 RNASE1P07998 156 aaKnown RBP16.03■□□□□ 0.16
SHANK1-202ENST00000359082 FAM74A3Q4VXF1 159 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 C9orf40Q8IXQ3 194 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 ZNF502Q8TBZ5 544 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 LTBP4Q8N2S1 1624 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 IGHV3OR16-12A0A075B7B8 117 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 C7orf77A4D0Y5 90 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 NFAM1Q8NET5 270 aaPredicted RBP16.03■□□□□ 0.16
SHANK1-202ENST00000359082 MS4A7Q9GZW8 240 aaPredicted RBP16.03■□□□□ 0.16
SHANK1-202ENST00000359082 C16orf97H3BN30 126 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 CLDN14O95500 239 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 ADIPOQQ15848 244 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 MIOXQ9UGB7 285 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 WIPI2Q9Y4P8 454 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 RREB1Q92766 1687 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 ADRA2AP08913 450 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 KLF9Q13886 244 aaPredicted RBP16.03■□□□□ 0.16
SHANK1-202ENST00000359082 MRGPRGQ86SM5 289 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 C9orf62Q8N4C0 152 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 ZNF519Q8TB69 540 aa16.03■□□□□ 0.16
SHANK1-202ENST00000359082 GMPPAQ96IJ6 420 aaPredicted RBP16.03■□□□□ 0.16
SHANK1-202ENST00000359082 PITX3O75364 302 aa16.02■□□□□ 0.16
SHANK1-202ENST00000359082 INO80CQ6PI98 192 aaPredicted RBP16.02■□□□□ 0.16
SHANK1-202ENST00000359082 PGLYRP3Q96LB9 341 aa16.02■□□□□ 0.16
SHANK1-202ENST00000359082 OPN3Q9H1Y3 402 aaPredicted RBP16.02■□□□□ 0.16
SHANK1-202ENST00000359082 PPIAL4EA0A075B759 164 aa16.02■□□□□ 0.16
SHANK1-202ENST00000359082 PPIAL4DF5H284 164 aa16.02■□□□□ 0.16
SHANK1-202ENST00000359082 PPIAL4FP0DN26 164 aa16.02■□□□□ 0.16
SHANK1-202ENST00000359082 IL36RNQ9UBH0 155 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms