RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 RCC1LQ96I51 464 aaKnown RBP15.12■□□□□ 0.01
RTN4-204ENST00000357732 HIST1H2AAQ96QV6 131 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 PILRBQ9UKJ0 227 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 FRYLO94915 3013 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 VPS13AQ96RL7 3174 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 TRBV24-1A0A075B6N3 115 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 PTBP3O95758 552 aaKnown RBP15.11■□□□□ 0.01
RTN4-204ENST00000357732 IFNA1P01562 189 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 OPN1MWP04001 364 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 OPN1MW2P0DN77 364 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 OPN1MW3P0DN78 364 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 ZFP36L1Q07352 338 aaKnown RBP15.11■□□□□ 0.01
RTN4-204ENST00000357732 ZNF787Q6DD87 383 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 TCEAL6Q6IPX3 200 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 PSMF1Q92530 271 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 FAM210BQ96KR6 192 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 FGF23Q9GZV9 251 aaPredicted RBP15.11■□□□□ 0.01
RTN4-204ENST00000357732 DMDP11532 3685 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 TGIF2-C20orf24A0A0A6YYL0 155 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 MOB1BQ7L9L4 216 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 HIST3H2BBQ8N257 126 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 PFDN5Q99471 154 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 BCL2L14Q9BZR8 327 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 GNG13Q9P2W3 67 aa15.11■□□□□ 0.01
RTN4-204ENST00000357732 OR5B21A6NL26 309 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 CFIP05156 583 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 HIST1H1BP16401 226 aaKnown RBP15.1■□□□□ 0.01
RTN4-204ENST00000357732 DUSP3P51452 185 aaPredicted RBP15.1■□□□□ 0.01
RTN4-204ENST00000357732 WIPI1Q5MNZ9 446 aaPredicted RBP15.1■□□□□ 0.01
RTN4-204ENST00000357732 PMS2CLQ68D20 193 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 MRGPRGQ86SM5 289 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 ZNF573Q86YE8 665 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 ABHD3Q8WU67 409 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 RPRMQ9NS64 109 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 VAX2Q9UIW0 290 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 MPC1Q9Y5U8 109 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 PI4KAP42356 2102 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 SYNGR2O43760 224 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 RFPL3SP0C7P2 107 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 MDH2P40926 338 aaKnown RBP15.1■□□□□ 0.01
RTN4-204ENST00000357732 RAB11AP62491 216 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 ZNF295-AS1Q8N0V1 137 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 GFOD1Q9NXC2 390 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 URGCP-MRPS24S4R325 110 aa15.1■□□□□ 0.01
RTN4-204ENST00000357732 CCDC163A0A0D9SF12 145 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 TRAPPC6AO75865 159 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 TRGC2P03986 189 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 APLNRP35414 380 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 ARF1P84077 181 aaKnown RBP15.09■□□□□ 0.01
RTN4-204ENST00000357732 HLA-CQ95604 372 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 PKIBQ9C010 78 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 SDF2L1Q9HCN8 221 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 SDK2Q58EX2 2172 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 FAM90A26D6RGX4 464 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.09■□□□□ 0.01
RTN4-204ENST00000357732 GDF1P27539 372 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 ARR3P36575 388 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 LRRC75BQ2VPJ9 315 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 ZNF525Q8N782 197 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 OR10V1Q8NGI7 309 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 RNASE11Q8TAA1 199 aaKnown RBP15.09■□□□□ 0.01
RTN4-204ENST00000357732 AGMATQ9BSE5 352 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 STRADBQ9C0K7 418 aa15.09■□□□□ 0.01
RTN4-204ENST00000357732 OR5H1A6NKK0 313 aa15.08■□□□□ 0
RTN4-204ENST00000357732 TMEM41BQ5BJD5 291 aa15.08■□□□□ 0
RTN4-204ENST00000357732 SPNS3Q6ZMD2 512 aa15.08■□□□□ 0
RTN4-204ENST00000357732 P4HA3Q7Z4N8 544 aa15.08■□□□□ 0
RTN4-204ENST00000357732 CA5BP1Q8WTZ4 195 aa15.08■□□□□ 0
RTN4-204ENST00000357732 OR5P3Q8WZ94 311 aa15.08■□□□□ 0
RTN4-204ENST00000357732 IER2Q9BTL4 223 aa15.08■□□□□ 0
RTN4-204ENST00000357732 LIN7CQ9NUP9 197 aaKnown RBP15.08■□□□□ 0
RTN4-204ENST00000357732 BOKQ9UMX3 212 aaPredicted RBP15.08■□□□□ 0
RTN4-204ENST00000357732 TIMM9Q9Y5J7 89 aa15.08■□□□□ 0
RTN4-204ENST00000357732 A0A0G2JRQ6 117 aa15.07■□□□□ 0
RTN4-204ENST00000357732 C5orf49A4QMS7 147 aa15.07■□□□□ 0
RTN4-204ENST00000357732 TNFSF12O43508 249 aa15.07■□□□□ 0
RTN4-204ENST00000357732 PSG2P11465 335 aa15.07■□□□□ 0
RTN4-204ENST00000357732 HS3ST6Q96QI5 342 aa15.07■□□□□ 0
RTN4-204ENST00000357732 CD300LBA8K4G0 201 aa15.07■□□□□ 0
RTN4-204ENST00000357732 CYB561P49447 251 aa15.07■□□□□ 0
RTN4-204ENST00000357732 GNG3P63215 75 aa15.07■□□□□ 0
RTN4-204ENST00000357732 DEFA6Q01524 100 aa15.07■□□□□ 0
RTN4-204ENST00000357732 OR2T2Q6IF00 324 aa15.07■□□□□ 0
RTN4-204ENST00000357732 PPP1R32Q7Z5V6 425 aa15.07■□□□□ 0
RTN4-204ENST00000357732 BATF2Q8N1L9 274 aa15.07■□□□□ 0
RTN4-204ENST00000357732 OR10D4PQ8NGN7 298 aa15.07■□□□□ 0
RTN4-204ENST00000357732 GPHA2Q96T91 129 aa15.07■□□□□ 0
RTN4-204ENST00000357732 PSENENQ9NZ42 101 aa15.07■□□□□ 0
RTN4-204ENST00000357732 ERRFI1Q9UJM3 462 aaPredicted RBP15.07■□□□□ 0
RTN4-204ENST00000357732 ANKRD30BLA7E2S9 258 aa15.06■□□□□ 0
RTN4-204ENST00000357732 PATE3B3GLJ2 98 aa15.06■□□□□ 0
RTN4-204ENST00000357732 HOXA6P31267 233 aa15.06■□□□□ 0
RTN4-204ENST00000357732 TMEM267Q0VDI3 215 aaPredicted RBP15.06■□□□□ 0
RTN4-204ENST00000357732 CDCP2Q5VXM1 449 aa15.06■□□□□ 0
RTN4-204ENST00000357732 ZNF383Q8NA42 475 aa15.06■□□□□ 0
RTN4-204ENST00000357732 ZNF845Q96IR2 970 aaPredicted RBP15.06■□□□□ 0
RTN4-204ENST00000357732 LRFN1Q9P244 771 aa15.06■□□□□ 0
RTN4-204ENST00000357732 IL36RNQ9UBH0 155 aa15.06■□□□□ 0
RTN4-204ENST00000357732 OR14J1Q9UGF5 321 aa15.06■□□□□ 0
RTN4-204ENST00000357732 PITPNC1Q9UKF7 332 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms