RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 RFESDQ8TAC1 157 aa11.27□□□□□ -0.6
SMC4-202ENST00000357388 ZNF519Q8TB69 540 aa11.27□□□□□ -0.6
SMC4-202ENST00000357388 ZNF71Q9NQZ8 489 aaPredicted RBP11.27□□□□□ -0.6
SMC4-202ENST00000357388 HIGD1AQ9Y241 93 aa11.27□□□□□ -0.6
SMC4-202ENST00000357388 CHD4Q14839 1912 aa11.27□□□□□ -0.6
SMC4-202ENST00000357388 H3BMH7 237 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 FFAR1O14842 300 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 LGALS3P17931 250 aaKnown RBP11.27□□□□□ -0.61
SMC4-202ENST00000357388 ZNF137PP52743 207 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 MEF2BQ02080 365 aaPredicted RBP11.27□□□□□ -0.61
SMC4-202ENST00000357388 OR1L8Q8NGR8 309 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 GPA33Q99795 319 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 UBTD1Q9HAC8 227 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 FOXJ2Q9P0K8 574 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 A0A1B0GTL3 188 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 RPL36A-HNRNPH2H7BZ11 118 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 MAS1LP35410 378 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 MAP1LC3AQ9H492 121 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 MBD1Q9UIS9 605 aaPredicted RBP11.27□□□□□ -0.61
SMC4-202ENST00000357388 ZNF735P0CB33 412 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 MEF2CQ06413 473 aaPredicted RBP11.27□□□□□ -0.61
SMC4-202ENST00000357388 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
SMC4-202ENST00000357388 LYZL2Q7Z4W2 148 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.27□□□□□ -0.61
SMC4-202ENST00000357388 OR10AG1Q8NH19 301 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 OR10D3Q8NH80 312 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 ABHD3Q8WU67 409 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 TMEM171Q8WVE6 324 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 SF3B5Q9BWJ5 86 aaKnown RBP11.27□□□□□ -0.61
SMC4-202ENST00000357388 CCL28Q9NRJ3 127 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 FRRS1LQ9P0K9 344 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 VSIG4Q9Y279 399 aa11.27□□□□□ -0.61
SMC4-202ENST00000357388 SOCS1O15524 211 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 PRICKLE4Q2TBC4 344 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 SLC23A3Q6PIS1 610 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 BHLHA15Q7RTS1 189 aaPredicted RBP11.26□□□□□ -0.61
SMC4-202ENST00000357388 TP53I13Q8NBR0 393 aaPredicted RBP11.26□□□□□ -0.61
SMC4-202ENST00000357388 ADAD2Q8NCV1 583 aaKnown RBP11.26□□□□□ -0.61
SMC4-202ENST00000357388 RARRES2Q99969 163 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 AKIRIN1Q9H9L7 192 aaPredicted RBP11.26□□□□□ -0.61
SMC4-202ENST00000357388 NPVFQ9HCQ7 196 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 ASCL3Q9NQ33 180 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 MYH9P35579 1960 aaKnown RBP11.26□□□□□ -0.61
SMC4-202ENST00000357388 C21orf140B9A014 251 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 HOXB1P14653 301 aaPredicted RBP11.26□□□□□ -0.61
SMC4-202ENST00000357388 TCTN1Q2MV58 587 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 DYNLRB2Q8TF09 96 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 GHITMQ9H3K2 345 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 A0A1W2PQD3 144 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 NXPH1P58417 271 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 ZNF660Q6AZW8 331 aaPredicted RBP11.26□□□□□ -0.61
SMC4-202ENST00000357388 SYT8Q8NBV8 401 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 PRR7Q8TB68 274 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 GNRHR2Q96P88 292 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 GGACTQ9BVM4 153 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 IGHV3-43A0A0B4J1X8 118 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 B4E171 279 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 PTP4A3O75365 173 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 SOD3P08294 240 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 IGHV3-43DP0DP04 118 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 MYF5P13349 255 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 PPP1CCP36873 323 aaKnown RBP11.26□□□□□ -0.61
SMC4-202ENST00000357388 TSPO2Q5TGU0 170 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 SPNS2Q8IVW8 549 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 OR8I2Q8N0Y5 310 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 PCGF1Q9BSM1 259 aa11.26□□□□□ -0.61
SMC4-202ENST00000357388 MS4A5Q9H3V2 200 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 SELENOTP62341 195 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 KLRB1Q12918 225 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 ZNF506Q5JVG8 444 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 DSPPQ9NZW4 1301 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 IGLV3-16A0A075B6K0 115 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 TGIF2-C20orf24A0A0A6YYL0 155 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 TMEM210A6NLX4 147 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 OR4C45A6NMZ5 311 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 CTLA4P16410 223 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 SKP2Q13309 424 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 KCNMB1Q16558 191 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 THSD4Q6ZMP0 1018 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 SFRP2Q96HF1 295 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 CBLN4Q9NTU7 201 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 NUDT3O95989 172 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
SMC4-202ENST00000357388 SGK494Q96LW2 274 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 R3HDMLQ9H3Y0 253 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 COA4Q9NYJ1 87 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 PRKNO60260 465 aaPredicted RBP11.25□□□□□ -0.61
SMC4-202ENST00000357388 RNF224P0DH78 156 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 CKS2P33552 79 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 RTP5Q14D33 572 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 ZNF600Q6ZNG1 722 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 SLC25A40Q8TBP6 338 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 MRGPRFQ96AM1 343 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 AQP10Q96PS8 301 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 ZDHHC8Q9ULC8 765 aa11.25□□□□□ -0.61
SMC4-202ENST00000357388 A1L4Q6 167 aa11.24□□□□□ -0.61
SMC4-202ENST00000357388 HYPMO75409 117 aa11.24□□□□□ -0.61
SMC4-202ENST00000357388 PPP1R3EQ9H7J1 279 aa11.24□□□□□ -0.61
SMC4-202ENST00000357388 LHX9Q9NQ69 397 aa11.24□□□□□ -0.61
SMC4-202ENST00000357388 A0A1B0GTH9 108 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms