RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 AMY1AP04745 511 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 LRRC29Q8WV35 223 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 SF3B5Q9BWJ5 86 aaKnown RBP11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 OR4X1Q8NH49 305 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 ABHD14AQ9BUJ0 271 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 PEF1Q9UBV8 284 aaKnown RBP11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 ZNF137PP52743 207 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 MGAT2Q10469 447 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 IBA57Q5T440 356 aaKnown RBP11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 OR8I2Q8N0Y5 310 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 OR1K1Q8NGR3 316 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 AQP3Q92482 292 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 RARRES2Q99969 163 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 TMEM222Q9H0R3 208 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 HOXB3P14651 431 aaPredicted RBP11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 TMEM196Q5HYL7 178 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 SLC23A3Q6PIS1 610 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 RPEQ96AT9 228 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 FLYWCH2Q96CP2 140 aaKnown RBP11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 PRRG2O14669 202 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 LAMTOR1Q6IAA8 161 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 LAIR2Q6ISS4 152 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 GBGT1Q8N5D6 347 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 GRAMD2BQ96HH9 432 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 LRRC61Q9BV99 259 aa11.12□□□□□ -0.63
SYNCRIP-201ENST00000355238 PIGYQ3MUY2 71 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 TTC32Q5I0X7 151 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 ANKRD37Q7Z713 158 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 PARLQ9H300 379 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 NPVFQ9HCQ7 196 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 TMEM140Q9NV12 185 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 CD74P04233 296 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 GZMHP20718 246 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 C1QL3Q5VWW1 255 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 GNRHR2Q96P88 292 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 KLHDC2Q9Y2U9 406 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 DNASE2O00115 360 aaPredicted RBP11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 PPP1CCP36873 323 aaKnown RBP11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 METAP1P53582 386 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 YBX2Q9Y2T7 364 aaKnown RBP11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 ARID1AO14497 2285 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 ZNF205O95201 554 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 CD40P25942 277 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 RELBQ01201 579 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 ALKBH6Q3KRA9 238 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 HIKESHIQ53FT3 197 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 C1orf100Q5SVJ3 147 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 WFDC8Q8IUA0 241 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 CDX2Q99626 313 aaPredicted RBP11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 MFRPQ9BY79 579 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 BCORQ6W2J9 1755 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 HLA-DRB1P01911 266 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 RPS11P62280 158 aaKnown RBP eCLIP11.11□□□□□ -0.635e-6■□□□□ 9.6
SYNCRIP-201ENST00000355238 CTAG1AP78358 180 aa11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 AMMECR1Q9Y4X0 333 aaPredicted RBP11.11□□□□□ -0.63
SYNCRIP-201ENST00000355238 M0R3E3 92 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 MOSPD3O75425 235 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 SRD5A2P31213 254 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 EFNB1P98172 346 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 OR8G5Q8NG78 346 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 OR10D3Q8NH80 312 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 TMEM45BQ96B21 275 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 RNF122Q9H9V4 155 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 NUP214P35658 2090 aaPredicted RBP11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 HOXA5P20719 270 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 CYB5R2Q6BCY4 276 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 UNQ9370/PRO34162Q6UXP9 181 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 ARL6IP6Q8N6S5 226 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 OR8B3Q8NGG8 313 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 TAF15Q92804 592 aaKnown RBP eCLIP11.1□□□□□ -0.632e-9■■■■□ 23.8
SYNCRIP-201ENST00000355238 SNRNP40Q96DI7 357 aaKnown RBP11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 PRSS27Q9BQR3 290 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 NUDT16L1Q9BRJ7 211 aaKnown RBP11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 ZPBPQ9BS86 351 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 SARGQ9BW04 601 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 PXMP4Q9Y6I8 212 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 TRBV5-7A0A0A0MS05 114 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 J3QT63 122 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 PRRX1P54821 245 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 RAC3P60763 192 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 FOXQ1Q9C009 403 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 CLN8Q9UBY8 286 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 NFAM1Q8NET5 270 aaPredicted RBP11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 HDHD3Q9BSH5 251 aaPredicted RBP11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 KIAA1551Q9HCM1 1747 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 NRAPQ86VF7 1730 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 COX6CP09669 75 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 RNF224P0DH78 156 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 RBM11P57052 281 aaKnown RBP11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 TMEM136Q6ZRR5 245 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 RAB37Q96AX2 223 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 PAXXQ9BUH6 204 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 CYR61O00622 381 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 RFLNBQ8N5W9 214 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 ABHD3Q8WU67 409 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 TMEM70Q9BUB7 260 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 TUBA4BQ9H853 241 aa11.1□□□□□ -0.63
SYNCRIP-201ENST00000355238 KBTBD11O94819 623 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 DNLZQ5SXM8 178 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms