RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 UNQ9370/PRO34162Q6UXP9 181 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 LCNL1Q6ZST4 164 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 PQLC1Q8N2U9 271 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 DCLRE1BQ9H816 532 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 BABAM2Q9NXR7 383 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 ZNF736B4DX44 427 aaPredicted RBP11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 GPX5O75715 221 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 MOSP00540 346 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 DGCR2P98153 550 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 GPR50Q13585 617 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 STX19Q8N4C7 294 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 ZNF439Q8NDP4 499 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 RBMXL1Q96E39 390 aaKnown RBP11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 S1PR3Q99500 378 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 C12orf77C9JDV5 145 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 ZNF137PP52743 207 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 RAB25P57735 213 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 RPS11P62280 158 aaKnown RBP eCLIP11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 FOXE3Q13461 319 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 DCTN2Q13561 401 aaKnown RBP11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 DEFB136Q30KP8 78 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 CXorf66Q5JRM2 361 aaPredicted RBP11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 DMKNQ6E0U4 476 aaPredicted RBP11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 NBEAL2Q6ZNJ1 2754 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 SLC25A48Q6ZT89 311 aaKnown RBP11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 RNF152Q8N8N0 203 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 ZNF555Q8NEP9 628 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 GHSRQ92847 366 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 RASL11BQ9BPW5 248 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 GON7Q9BXV9 100 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 RCC2Q9P258 522 aaKnown RBP11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 ZMAT5Q9UDW3 170 aaKnown RBP11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 CLEC2DQ9UHP7 191 aa11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 DIMT1Q9UNQ2 313 aaKnown RBP11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 EXOSC1Q9Y3B2 195 aaKnown RBP11.34□□□□□ -0.59
PRPF40A-201ENST00000354363 SORL1Q92673 2214 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 TRAV8-7A0A075B6U6 113 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 IRGMA1A4Y4 181 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 MCRIP1C9JLW8 97 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 ELANEP08246 267 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 MYL12AP19105 171 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 CDX1P47902 265 aaPredicted RBP11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 ZNF134P52741 427 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 F2RL1P55085 397 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 GP2P55259 537 aaKnown RBP11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 GPR176Q14439 515 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 KIR2DS1Q14954 304 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 Q499Y3 187 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 SYT6Q5T7P8 510 aaPredicted RBP11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 OR8U1Q8NH10 309 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 OR4K15Q8NH41 348 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 TFAP2CQ92754 450 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 MUL1Q969V5 352 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 WWC2-AS2Q96NR7 200 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 HSPB9Q9BQS6 159 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 SPACA1Q9HBV2 294 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 SMPD3Q9NY59 655 aaPredicted RBP11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 ETAA1Q9NY74 926 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 TRAPPC2LQ9UL33 140 aa11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 MRPS28Q9Y2Q9 187 aaKnown RBP11.33□□□□□ -0.6
PRPF40A-201ENST00000354363 SPINT2O43291 252 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 TXNL1O43396 289 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 RRP9O43818 475 aaKnown RBP11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 HBZP02008 142 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 FSTP19883 344 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 VHLP40337 213 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 CFHR3Q02985 330 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 CT45A1Q5HYN5 189 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 C6orf183Q5T699 404 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 GAPTQ8N292 157 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 FAM71E2Q8N5Q1 922 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 ZFP41Q8N8Y5 198 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 OR8H1Q8NGG4 311 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 OR10V1Q8NGI7 309 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 OR1L1Q8NH94 360 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 CT45A3Q8NHU0 189 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 PGLYRP3Q96LB9 341 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 RDH12Q96NR8 316 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 RAB9BQ9NP90 201 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 GNG12Q9UBI6 72 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 CKLFQ9UBR5 152 aa11.32□□□□□ -0.6
PRPF40A-201ENST00000354363 TRBV5-7A0A0A0MS05 114 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 RAMP3O60896 148 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 VSIG8P0DPA2 414 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 LUMP51884 338 aaPredicted RBP11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 YIF1BQ5BJH7 314 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 RAB12Q6IQ22 244 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 JAGN1Q8N5M9 183 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 ZNF485Q8NCK3 441 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 OR5M8Q8NGP6 311 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 MRPS24Q96EL2 167 aaKnown RBP11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 RYR3Q15413 4870 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 A0A1W2PPK0 400 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 IGHG4P01861 327 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 RCC1P18754 421 aaPredicted RBP11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 VDAC1P21796 283 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 SOX6P35712 828 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 LSAMPQ13449 338 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms