RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ALG5Q9Y673 324 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 PIEZO2Q9H5I5 2752 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 CABIN1Q9Y6J0 2220 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 IGHV3OR16-9A0A0B4J2B5 98 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 FTCDNL1E5RQL4 147 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 PGRMC1O00264 195 aaKnown RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 LIN7AO14910 233 aaPredicted RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 AZIN1O14977 448 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 PSMG1O95456 288 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 EPPINO95925 133 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ORM1P02763 201 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SLC35G6P0C7Q6 338 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 CD99P14209 185 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 IL3RAP26951 378 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 GTF2H1P32780 548 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 HSPA13P48723 471 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 VBP1P61758 197 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 TIMM10P62072 90 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 TSPAN5P62079 268 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ELF3P78545 371 aaPredicted RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SYCNQ0VAF6 134 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF235Q14590 738 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 TBC1D28Q2M2D7 210 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 RGS21Q2M5E4 152 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 DNAL1Q4LDG9 190 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SYT6Q5T7P8 510 aaPredicted RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 DRAM2Q6UX65 266 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 LINC01551Q86U37 167 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 DNAAF3Q8N9W5 541 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF420Q8TAQ5 688 aaPredicted RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 DOK4Q8TEW6 326 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 CASTOR1Q8WTX7 329 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 CYGBQ8WWM9 190 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 CCL17Q92583 94 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 PTX4Q96A99 478 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 BTN2A3PQ96KV6 586 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF285Q96NJ3 590 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SLC25A39Q9BZJ4 359 aaPredicted RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 PRORYQ9H606 182 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 NOX3Q9HBY0 568 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 FKBP14Q9NWM8 211 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 BAIAP2Q9UQB8 552 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 FIS1Q9Y3D6 152 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 IGHV6-1A0A0B4J1U7 121 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 IGHV3-74A0A0B4J1X5 117 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 PNMA8CA0A1B0GUJ8 204 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 BTNL10A8MVZ5 291 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 COPEO14579 308 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 IGKV1-39P01597 117 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 IGKV1D-39P04432 117 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 HLA-DPB1P04440 258 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 TYMSP04818 313 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 MYL9P24844 172 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 RPS12P25398 132 aaKnown RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 RPL34P49207 117 aaKnown RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ERFP50548 548 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 GRB2P62993 217 aaKnown RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 KDSRQ06136 332 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 C2orf54Q08AI8 447 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 MGAT3Q09327 533 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 LAMTOR4Q0VGL1 99 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 KRTAP20-1Q3LI63 56 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ORMDL2Q53FV1 153 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 COA6Q5JTJ3 125 aaKnown RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ELP2Q6IA86 826 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SPOPLQ6IQ16 392 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 CLEC19AQ6UXS0 136 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 RASSF6Q6ZTQ3 369 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ADM2Q7Z4H4 148 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 RIMKLAQ8IXN7 391 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ZNRF2Q8NHG8 242 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 NELFBQ8WX92 580 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SRSF12Q8WXF0 261 aaKnown RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SNF8Q96H20 258 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ANKRD36BP1Q96IX9 119 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 UCK1Q9HA47 277 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 HMG20AQ9NP66 347 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 STOML2Q9UJZ1 356 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 IGSF10Q6WRI0 2623 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ZNFX1Q9P2E3 1918 aaKnown RBP1.09□□□□□ -2.23
BRCA1-202ENST00000354071 METTL15A6NJ78 407 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF705GA8MUZ8 300 aaPredicted RBP1.09□□□□□ -2.23
BRCA1-202ENST00000354071 EVPLLA8MZ36 301 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 RAD1O60671 282 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 FAM107AO95990 144 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 IGLV3-25P01717 112 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 IFNA16P05015 189 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 IL6P05231 212 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 ZDHHC11BP0C7U3 371 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 SEC11BP0C7V7 166 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF35P13682 527 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 SPNP16150 400 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TAC1P20366 129 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 PVALBP20472 110 aaPredicted RBP1.09□□□□□ -2.23
BRCA1-202ENST00000354071 ME2P23368 584 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 GABRR1P24046 479 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 SYNJ2BPP57105 145 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 VSX2P58304 361 aaPredicted RBP1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TAS2R39P59534 338 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 DR1Q01658 176 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms