RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 FAM157CP0CG43 387 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 PPP2CBP62714 309 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 TMEM230Q96A57 120 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 APOMO95445 188 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 ESDP10768 282 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 MRGPREQ86SM8 312 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 C1orf174Q8IYL3 243 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 TBC1D26Q86UD7 250 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 NPEPL1Q8NDH3 523 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 OR1N1Q8NGS0 311 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 PLPPR1Q8TBJ4 325 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 FAM234AQ9H0X4 552 aa11.15□□□□□ -0.62
COL6A3-203ENST00000353578 KBTBD11-OT1A0A1B0GTJ5 212 aa11.15□□□□□ -0.63
COL6A3-203ENST00000353578 C1SP09871 688 aa11.15□□□□□ -0.63
COL6A3-203ENST00000353578 KIR2DL1P43626 348 aaPredicted RBP11.15□□□□□ -0.63
COL6A3-203ENST00000353578 KIR2DL2P43627 348 aaPredicted RBP11.15□□□□□ -0.63
COL6A3-203ENST00000353578 TIMP4Q99727 224 aa11.15□□□□□ -0.63
COL6A3-203ENST00000353578 A0A1B0GX78 115 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 TMEM88BA6NKF7 163 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 ITGB1BP1O14713 200 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 PVRP15151 417 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 CTSSP25774 331 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 GAGE2BQ13066 116 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 KCNMB1Q16558 191 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 GAGE2EQ4V326 116 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 GAGE2DQ9UEU5 116 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 AMMECR1Q9Y4X0 333 aaPredicted RBP11.14□□□□□ -0.63
COL6A3-203ENST00000353578 P2RY2P41231 377 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 RBPJQ06330 500 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 STRCP1A6NGW2 1772 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 HBBP68871 147 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 TMEM222Q9H0R3 208 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 A0A1W2PRS3 328 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 RPS16P62249 146 aaKnown RBP11.14□□□□□ -0.63
COL6A3-203ENST00000353578 TSC2P49815 1807 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 A0A0A6YYD5 115 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 CYP2G1PQ6ZSU1 146 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 FGF13Q92913 245 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 C20orf141Q9NUB4 165 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 CDIPTO14735 213 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 PPYP01298 95 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 FBXL14Q8N1E6 418 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 GTF3AQ92664 365 aaKnown RBP11.14□□□□□ -0.63
COL6A3-203ENST00000353578 LINC00615Q96LM1 132 aaPredicted RBP11.14□□□□□ -0.63
COL6A3-203ENST00000353578 AICDAQ9GZX7 198 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 S100A7L2Q5SY68 101 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 UFC1Q9Y3C8 167 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 NPTNQ9Y639 398 aa11.14□□□□□ -0.63
COL6A3-203ENST00000353578 CDX4O14627 284 aaPredicted RBP11.13□□□□□ -0.63
COL6A3-203ENST00000353578 EPPINO95925 133 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 MYBPHQ13203 477 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 MS4A6AQ9H2W1 248 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 WNT16Q9UBV4 365 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 IGHV1-69-2A0A0G2JMI3 117 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A10PA6NDY2 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A18PA6NE21 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A16PA6NEW6 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A20PA6NIJ5 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A8PA6NJQ4 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A7PA6NKC0 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A22PA8MWA6 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A12PA8MX19 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A5PA8MXJ8 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A23PA8MXZ1 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 TMEM50AO95807 157 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A15PP0C7V4 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A13PP0C7W8 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A14PP0C7W9 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FAM90A24PP0C7X0 464 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 FADS6Q8N9I5 356 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 ZPBPQ9BS86 351 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 TRAV9-2A0A087WT02 112 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 KLRC4-KLRK1H3BQV0 150 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 RNF224P0DH78 156 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 NKG7Q16617 165 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 IFITM3Q01628 133 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 CTU1Q7Z7A3 348 aaKnown RBP11.13□□□□□ -0.63
COL6A3-203ENST00000353578 NT5CQ8TCD5 201 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 PTPRZ1P23471 2315 aaPredicted RBP11.13□□□□□ -0.63
COL6A3-203ENST00000353578 TNFRSF4P43489 277 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 LPAR6P43657 344 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 ARG2P78540 354 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 TMEM178AQ8NBL3 297 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 HSF4Q9ULV5 492 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 BCAT2O15382 392 aaPredicted RBP11.13□□□□□ -0.63
COL6A3-203ENST00000353578 OR10W1Q8NGF6 305 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 PTPRDP23468 1912 aa11.13□□□□□ -0.63
COL6A3-203ENST00000353578 A0A1B0GW64 132 aa11.12□□□□□ -0.63
COL6A3-203ENST00000353578 TMIGD3P0DMS9 266 aaPredicted RBP11.12□□□□□ -0.63
COL6A3-203ENST00000353578 TTC9CQ8N5M4 171 aa11.12□□□□□ -0.63
COL6A3-203ENST00000353578 MRGPRX1Q96LB2 322 aa11.12□□□□□ -0.63
COL6A3-203ENST00000353578 WSB2Q9NYS7 404 aaPredicted RBP11.12□□□□□ -0.63
COL6A3-203ENST00000353578 VSIG4Q9Y279 399 aa11.12□□□□□ -0.63
COL6A3-203ENST00000353578 SMOC1Q9H4F8 434 aa11.12□□□□□ -0.63
COL6A3-203ENST00000353578 ZNF665Q9H7R5 613 aa11.12□□□□□ -0.63
COL6A3-203ENST00000353578 ASPDHA6ND91 283 aa11.12□□□□□ -0.63
COL6A3-203ENST00000353578 PAGE4O60829 102 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms