RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 P4HA3Q7Z4N8 544 aa18.76■□□□□ 0.59
UPF3A-201ENST00000351487 A0A1W2PR80 420 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 COLCA2A8K830 154 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 WRBO00258 174 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 SERPINE2P07093 398 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 RAC2P15153 192 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 IDH3GP51553 393 aaPredicted RBP18.75■□□□□ 0.59
UPF3A-201ENST00000351487 PAX9P55771 341 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 ZNF146Q15072 292 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 TESK1Q15569 626 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 GABRA6Q16445 453 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 AVPI1Q5T686 147 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 TMPRSS7Q7RTY8 843 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 OR51H1Q8NH63 302 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 IL1F10Q8WWZ1 152 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 SMDT1Q9H4I9 107 aa18.75■□□□□ 0.59
UPF3A-201ENST00000351487 IQCF6A8MYZ5 107 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 CST7O76096 145 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 IGHG3P01860 377 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 PSG2P11465 335 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 CD82P27701 267 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 RAB13P51153 203 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 ZNF154Q13106 437 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 C15orf54Q8N8G6 183 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 GPR146Q96CH1 333 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 GNPNAT1Q96EK6 184 aaPredicted RBP18.74■□□□□ 0.59
UPF3A-201ENST00000351487 SAV1Q9H4B6 383 aaPredicted RBP18.74■□□□□ 0.59
UPF3A-201ENST00000351487 MBNL3Q9NUK0 354 aaKnown RBP18.74■□□□□ 0.59
UPF3A-201ENST00000351487 KIAA1324LA8MWY0 1029 aaPredicted RBP18.74■□□□□ 0.59
UPF3A-201ENST00000351487 SIRPB1O00241 398 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 CRYBA1P05813 215 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 CEACAM1P13688 526 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 PMP22Q01453 160 aa18.74■□□□□ 0.59
UPF3A-201ENST00000351487 LSM10Q969L4 123 aaKnown RBP18.74■□□□□ 0.59
UPF3A-201ENST00000351487 FOLR2P14207 255 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 ERVS71-1P61550 626 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 AWAT1Q58HT5 328 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 EGLN1Q9GZT9 426 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 SLC35B3Q9H1N7 401 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 BDP1A6H8Y1 2624 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 GUSBP1Q15486 140 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 INO80CQ6PI98 192 aaPredicted RBP18.73■□□□□ 0.59
UPF3A-201ENST00000351487 ETV3LQ6ZN32 361 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 ZNF295-AS1Q8N0V1 137 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 SLC25A40Q8TBP6 338 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 ATP5SQ99766 215 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 TRAPPC2LQ9UL33 140 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 WIPI2Q9Y4P8 454 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 RFNGQ9Y644 331 aa18.73■□□□□ 0.59
UPF3A-201ENST00000351487 BTBD17A6NE02 478 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 TMEM210A6NLX4 147 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 TRIP6Q15654 476 aaKnown RBP18.72■□□□□ 0.59
UPF3A-201ENST00000351487 SP5Q6BEB4 398 aaPredicted RBP18.72■□□□□ 0.59
UPF3A-201ENST00000351487 RAB40CQ96S21 281 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 FBXO7Q9Y3I1 522 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 MED19A0JLT2 244 aaPredicted RBP18.72■□□□□ 0.59
UPF3A-201ENST00000351487 NXPH3O95157 252 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 IGKV1-39P01597 117 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 IGKV1D-39P04432 117 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 ACAA1P09110 424 aaPredicted RBP18.72■□□□□ 0.59
UPF3A-201ENST00000351487 SELEP16581 610 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 EPHA1P21709 976 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 SPSB3Q6PJ21 355 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 Q6ZT83 130 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 FAM214BQ7L5A3 538 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 TMEM217Q8N7C4 229 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 HIPK2Q9H2X6 1198 aa18.72■□□□□ 0.59
UPF3A-201ENST00000351487 CDIPTO14735 213 aa18.71■□□□□ 0.59
UPF3A-201ENST00000351487 SH2D1BO14796 132 aa18.71■□□□□ 0.59
UPF3A-201ENST00000351487 TXNL1O43396 289 aa18.71■□□□□ 0.59
UPF3A-201ENST00000351487 LYZL6O75951 148 aa18.71■□□□□ 0.59
UPF3A-201ENST00000351487 NXPH2O95156 264 aa18.71■□□□□ 0.59
UPF3A-201ENST00000351487 ALKBH6Q3KRA9 238 aa18.71■□□□□ 0.59
UPF3A-201ENST00000351487 GCNT2Q8N0V5 402 aa18.71■□□□□ 0.59
UPF3A-201ENST00000351487 TUBA4BQ9H853 241 aa18.71■□□□□ 0.59
UPF3A-201ENST00000351487 KCNJ16Q9NPI9 418 aa18.71■□□□□ 0.59
UPF3A-201ENST00000351487 RPS10P5Q9NQ39 176 aa18.71■□□□□ 0.59
UPF3A-201ENST00000351487 TRAV39A0A0B4J263 110 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 C7orf77A4D0Y5 90 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 CNOT4O95628 575 aaKnown RBP18.7■□□□□ 0.58
UPF3A-201ENST00000351487 PSG7Q13046 419 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 STX12Q86Y82 276 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 LINC00518Q8N0U6 118 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 OR1J1Q8NGS3 322 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 CLCC1Q96S66 551 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 HES4Q9HCC6 221 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 LIN7CQ9NUP9 197 aaKnown RBP18.7■□□□□ 0.58
UPF3A-201ENST00000351487 WSB1Q9Y6I7 421 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 CDRT15L2A8MXV6 281 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 DFFBO76075 338 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 HOXB1P14653 301 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-201ENST00000351487 CD200P41217 278 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 RPL23AP62750 156 aaKnown RBP18.7■□□□□ 0.58
UPF3A-201ENST00000351487 ABHD14AQ9BUJ0 271 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 BIN3Q9NQY0 253 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 KIAA1456Q9P272 454 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 CELSR3Q9NYQ7 3312 aa18.7■□□□□ 0.58
UPF3A-201ENST00000351487 SULT1A1P50225 295 aa18.69■□□□□ 0.58
UPF3A-201ENST00000351487 Q6ZRM9 215 aa18.69■□□□□ 0.58
UPF3A-201ENST00000351487 C14orf79Q96F83 325 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms