RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ZNF391Q9UJN7 358 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 PROB1E7EW31 1015 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 M0R1B8 84 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 COLCA1Q6ZS62 124 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 ZNF573Q86YE8 665 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 ZNF561Q8N587 486 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 SCCPDHQ8NBX0 429 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 OR5P3Q8WZ94 311 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 RAB18Q9NP72 206 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 MEMO1Q9Y316 297 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 RFNGQ9Y644 331 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 IGHV3-43A0A0B4J1X8 118 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 DEFB108AA8MXU0 73 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 IGHV3-43DP0DP04 118 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 RPS2P15880 293 aaKnown RBP11.83□□□□□ -0.52
TRIM4-201ENST00000349062 RPL12P30050 165 aaKnown RBP11.83□□□□□ -0.52
TRIM4-201ENST00000349062 FGF12P61328 243 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 FAHD2BQ6P2I3 314 aaPredicted RBP11.83□□□□□ -0.52
TRIM4-201ENST00000349062 ZNF808Q8N4W9 903 aaPredicted RBP11.83□□□□□ -0.52
TRIM4-201ENST00000349062 PRSS33Q8NF86 280 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 SARAFQ96BY9 339 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 FAHD2AQ96GK7 314 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 NAA60Q9H7X0 242 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 S100A8P05109 93 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 KIR2DL2P43627 348 aaPredicted RBP11.83□□□□□ -0.52
TRIM4-201ENST00000349062 UCP2P55851 309 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 ZNF154Q13106 437 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 PRSS54Q6PEW0 395 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 ZNF600Q6ZNG1 722 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 TBC1D26Q86UD7 250 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 SLC35G3Q8N808 338 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 NUDT16L1Q9BRJ7 211 aaKnown RBP11.83□□□□□ -0.52
TRIM4-201ENST00000349062 FBXL17Q9UF56 701 aa11.83□□□□□ -0.52
TRIM4-201ENST00000349062 SMPD2O60906 423 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 TUSC2O75896 110 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 CTSDP07339 412 aaPredicted RBP11.82□□□□□ -0.52
TRIM4-201ENST00000349062 EIF2S3P41091 472 aaKnown RBP11.82□□□□□ -0.52
TRIM4-201ENST00000349062 RAB2AP61019 212 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 RPS16P62249 146 aaKnown RBP11.82□□□□□ -0.52
TRIM4-201ENST00000349062 ZNF818PQ6ZRF7 136 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 DPPA2Q7Z7J5 298 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 OR5A2Q8NGI9 324 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 KLF14Q8TD94 323 aaPredicted RBP11.82□□□□□ -0.52
TRIM4-201ENST00000349062 GTF3AQ92664 365 aaKnown RBP11.82□□□□□ -0.52
TRIM4-201ENST00000349062 SPSB4Q96A44 273 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 S100PBPQ96BU1 408 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 RCL1Q9Y2P8 373 aaKnown RBP11.82□□□□□ -0.52
TRIM4-201ENST00000349062 NKX2-6A6NCS4 301 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 UMAD1C9J7I0 102 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 RPL36A-HNRNPH2H7BZ11 118 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 CLN5O75503 358 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 SMIM6P0DI80 62 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 SYT3Q9BQG1 590 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 FAM234AQ9H0X4 552 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 MYOZ1Q9NP98 299 aaPredicted RBP11.82□□□□□ -0.52
TRIM4-201ENST00000349062 S100PP25815 95 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 TMEM33P57088 247 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 ARFGEF3Q5TH69 2177 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 RTL6Q6ICC9 239 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 WDR86Q86TI4 376 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 DEFB108BQ8NET1 73 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 KCNJ16Q9NPI9 418 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 RALYQ9UKM9 306 aaKnown RBP11.82□□□□□ -0.52
TRIM4-201ENST00000349062 HSF4Q9ULV5 492 aa11.82□□□□□ -0.52
TRIM4-201ENST00000349062 C5orf52A6NGY3 159 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 CRYM-AS1A6NIL9 109 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 CST7O76096 145 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 EIF5AP63241 154 aaKnown RBP11.81□□□□□ -0.52
TRIM4-201ENST00000349062 NHLH2Q02577 135 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 CCDC54Q8NEL0 328 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 OR2Z1Q8NG97 314 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 RHOVQ96L33 236 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 RTL8AQ9BWD3 113 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 DLL3Q9NYJ7 618 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 PROCRQ9UNN8 238 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 TRAV24A0A0B4J272 114 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 DBX1A6NMT0 343 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 SSSCA1O60232 199 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 GABRA2P47869 451 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 AESQ08117 197 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 KIAA0141Q14154 515 aaPredicted RBP11.81□□□□□ -0.52
TRIM4-201ENST00000349062 HERPUD1Q15011 391 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 DAZAP2Q15038 168 aaPredicted RBP11.81□□□□□ -0.52
TRIM4-201ENST00000349062 GABRA6Q16445 453 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 FAM201AQ5SY85 155 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 CISD2Q8N5K1 135 aaKnown RBP11.81□□□□□ -0.52
TRIM4-201ENST00000349062 OR10J5Q8NHC4 309 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 ERGIC1Q969X5 290 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 NMES1Q9C002 83 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 IGHV3OR15-7A0A075B7D8 119 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 C3orf85A0A1B0GTC6 90 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 ZNF727A8MUV8 499 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 MBPP02686 304 aaPredicted RBP11.81□□□□□ -0.52
TRIM4-201ENST00000349062 MT-ND4LP03901 98 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 CECR9P0C854 216 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 DTYMKP23919 212 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 GCH1P30793 250 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 DVL1P1P54792 670 aaPredicted RBP11.81□□□□□ -0.52
TRIM4-201ENST00000349062 GUK1Q16774 197 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 LRP11Q86VZ4 500 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms