RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 HLA-CQ95604 372 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 IGKV3D-11A0A0A0MRZ8 115 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 A0A0U1RQV5 110 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 UBE2L5PA0A1B0GUS4 154 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 SCTP09683 121 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 NPBWR2P48146 333 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 C9orf50Q5SZB4 431 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 RTL10Q7L3V2 364 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 GJC3Q8NFK1 279 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 TMEM106BQ9NUM4 274 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 ZNF407Q9C0G0 2248 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 TNFSF13O75888 250 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 CDKN1AP38936 164 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 COL5A1-AS1Q5SY13 56 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 FAM131CQ96AQ9 280 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 HIPK2Q9H2X6 1198 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 GPR35Q9HC97 309 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 AQP7O14520 342 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 PDCD6O75340 191 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 TCN2P20062 427 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 MSR1P21757 451 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 MMDQ15546 238 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 RSPO1Q2MKA7 263 aaPredicted RBP13.16□□□□□ -0.3
LMNA-201ENST00000347559 SPANXN5Q5MJ07 72 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 OR8G2PQ6IF36 304 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 Q6ZWC4 215 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 RPP25LQ8N5L8 163 aaKnown RBP13.16□□□□□ -0.3
LMNA-201ENST00000347559 GPR146Q96CH1 333 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 HSPB9Q9BQS6 159 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 TUBG2Q9NRH3 451 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 PSENENQ9NZ42 101 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 C1QTNF9BB2RNN3 333 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 UMODP07911 640 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 PMP22Q01453 160 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 EIF3IQ13347 325 aaKnown RBP13.16□□□□□ -0.3
LMNA-201ENST00000347559 TMEM183BQ1AE95 376 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 NUFIP2Q7Z417 695 aaKnown RBP13.16□□□□□ -0.3
LMNA-201ENST00000347559 ZNF525Q8N782 197 aa13.16□□□□□ -0.3
LMNA-201ENST00000347559 IGKV1D-33P01593 117 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 IGKV1-33P01594 117 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.15□□□□□ -0.3
LMNA-201ENST00000347559 ZNF295-AS1Q8N0V1 137 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 ANAPC16Q96DE5 110 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 ABHD14BQ96IU4 210 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 OR4C12Q96R67 309 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 RNF150Q9ULK6 438 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 ASXL3Q9C0F0 2248 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 C20orf202A1L168 122 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 SERPINE2P07093 398 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 DEFA4P12838 97 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 PTTG1IPP53801 180 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 AGMATQ9BSE5 352 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 WNT5BQ9H1J7 359 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 TMEM9BQ9NQ34 198 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 ZFP30Q9Y2G7 519 aa13.15□□□□□ -0.3
LMNA-201ENST00000347559 TLX3O43711 291 aaPredicted RBP13.15□□□□□ -0.31
LMNA-201ENST00000347559 IGLV3-1P01715 115 aa13.15□□□□□ -0.31
LMNA-201ENST00000347559 UCP1P25874 307 aa13.15□□□□□ -0.31
LMNA-201ENST00000347559 OR10V1Q8NGI7 309 aa13.15□□□□□ -0.31
LMNA-201ENST00000347559 EXTL1Q92935 676 aa13.15□□□□□ -0.31
LMNA-201ENST00000347559 MRGPRX1Q96LB2 322 aa13.15□□□□□ -0.31
LMNA-201ENST00000347559 CIB3Q96Q77 187 aaPredicted RBP13.15□□□□□ -0.31
LMNA-201ENST00000347559 CACNG5Q9UF02 275 aa13.15□□□□□ -0.31
LMNA-201ENST00000347559 PTRH2Q9Y3E5 179 aaKnown RBP13.15□□□□□ -0.31
LMNA-201ENST00000347559 DUXBA0A1W2PPF3 345 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 SLC22A20A6NK97 555 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 PAGE4O60829 102 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 CAPZBP47756 277 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 PPP1CBP62140 327 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 RNF151Q2KHN1 245 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 PHYHD1Q5SRE7 291 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 ZNF709Q8N972 641 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 SPSB1Q96BD6 273 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 IMMP2LQ96T52 175 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 C20orf144Q9BQM9 153 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 FAM103A1Q9BTL3 118 aaKnown RBP13.14□□□□□ -0.31
LMNA-201ENST00000347559 IGHV3-15A0A0B4J1V0 119 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 ADMP35318 185 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 SRP14P37108 136 aaKnown RBP13.14□□□□□ -0.31
LMNA-201ENST00000347559 YPEL5P62699 121 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 NOGQ13253 232 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 CNN3Q15417 329 aaKnown RBP13.14□□□□□ -0.31
LMNA-201ENST00000347559 FBXW9Q5XUX1 488 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 Q6ZRM9 215 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 ZDHHC11Q9H8X9 412 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 CHD9Q3L8U1 2897 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 WDR87Q6ZQQ6 2873 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 C2orf16Q68DN1 1984 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 PCDH15Q96QU1 1955 aa13.14□□□□□ -0.31
LMNA-201ENST00000347559 PGPEP1LA6NFU8 196 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 NRASP01111 189 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 ESPL1Q14674 2120 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 Q6ZVH6 145 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 C22orf15Q8WYQ4 148 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 PIGCQ92535 297 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 MRGPRX4Q96LA9 322 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 RAB40CQ96S21 281 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 SAMD10Q9BYL1 202 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
LMNA-201ENST00000347559 TRAV34A0A0B4J273 112 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms