RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 C10orf35Q96D05 121 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 LEPROTL1O95214 131 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 OR2Y1Q8NGV0 311 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 MRGPRDQ8TDS7 321 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 TMEM222Q9H0R3 208 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 PEF1Q9UBV8 284 aaKnown RBP10.58□□□□□ -0.72
COL12A1-202ENST00000345356 SSC5DA1L4H1 1573 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 KBTBD11O94819 623 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 CRYABP02511 175 aaKnown RBP10.57□□□□□ -0.72
COL12A1-202ENST00000345356 FOLR2P14207 255 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 KMT5CQ86Y97 462 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 C5orf17Q8NAS9 161 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 OR6X1Q8NH79 312 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 C14orf144Q96I85 54 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 SOSTQ9BQB4 213 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 IL19Q9UHD0 177 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 TBX6O95947 436 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-202ENST00000345356 BGLAPP02818 100 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 C1orf100Q5SVJ3 147 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 DCAF12Q5T6F0 453 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 REG4Q9BYZ8 158 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 DPRXA6NFQ7 191 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 LYG1Q8N1E2 194 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 MUC15Q8N387 334 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 OR5A2Q8NGI9 324 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 RHBDD1Q8TEB9 315 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 CHST5Q9GZS9 411 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 A0A087WWC5 75 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 TRGV10A0A0A0MS01 117 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 KLRC4-KLRK1H3BQV0 150 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 S100A4P26447 101 aaKnown RBP10.57□□□□□ -0.72
COL12A1-202ENST00000345356 DSCR4P56555 118 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-202ENST00000345356 WNT10AQ9GZT5 417 aa10.57□□□□□ -0.72
COL12A1-202ENST00000345356 TMEM265A0A087WTH1 108 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 COLCA2A8K830 154 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 SPINK2P20155 84 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 RELBQ01201 579 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 PARM1Q6UWI2 310 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 VASH2Q86V25 355 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 MFRPQ9BY79 579 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HIST1H2BKO60814 126 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HIST1H2BJP06899 126 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 GCSHP23434 173 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HIST1H2BOP23527 126 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HIST1H2BBP33778 126 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HIST1H2BDP58876 126 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HIST1H2BCP62807 126 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HIST2H2BEQ16778 126 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 TAF15Q92804 592 aaKnown RBP eCLIP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HIST1H2BHQ93079 126 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 FLYWCH2Q96CP2 140 aaKnown RBP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HIST1H2BNQ99877 126 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HIST1H2BMQ99879 126 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 A6NNC1 897 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HRKO00198 91 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 LMX1BO60663 402 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 NPIPB7O75200 414 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 SRP19P09132 144 aaKnown RBP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 IBA57Q5T440 356 aaKnown RBP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 MYOZ1Q9NP98 299 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 ITGBL1O95965 494 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 HBZP02008 142 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 SMIM17P0DL12 118 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 NUTF2P61970 127 aaKnown RBP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 BIVMQ86UB2 503 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 OR1B1Q8NGR6 318 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 CLDN16Q9Y5I7 305 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 RPL36A-HNRNPH2H7BZ11 118 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 CCL2P13500 99 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 CBLN1P23435 193 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 PMELP40967 661 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 KIR2DS2P43631 304 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 RPS11P62280 158 aaKnown RBP eCLIP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 SRSF5Q13243 272 aaKnown RBP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 C16orf47Q6ZP98 133 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 CPEB3Q8NE35 698 aaKnown RBP10.56□□□□□ -0.72
COL12A1-202ENST00000345356 BRWD1Q9NSI6 2320 aa10.56□□□□□ -0.72
COL12A1-202ENST00000345356 IGHV3-13P01766 116 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 IGHV3-7P01780 117 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 CD1BP29016 333 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 AMY1AP04745 511 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 GPX4P36969 197 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-202ENST00000345356 LSM6P62312 80 aaKnown RBP10.55□□□□□ -0.72
COL12A1-202ENST00000345356 TEPPQ6URK8 271 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 NR2C2APQ86WQ0 139 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 CADM4Q8NFZ8 388 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 OR2I1PQ8NGU4 316 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 AUP1Q9Y679 476 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 A0A1W2PPV9 198 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 CEBPDP49716 269 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-202ENST00000345356 VMA21Q3ZAQ7 101 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 ABHD14BQ96IU4 210 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 QTRT1Q9BXR0 403 aaKnown RBP10.55□□□□□ -0.72
COL12A1-202ENST00000345356 DLEC1Q9Y238 1755 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 LAMTOR5O43504 91 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 MOB3AQ96BX8 217 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 GAL3ST2Q9H3Q3 398 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 TMEM38BQ9NVV0 291 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 TRAV39A0A0B4J263 110 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms