RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 COX7A1P24310 79 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 MNDAP41218 407 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 CDNFQ49AH0 187 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 PLAC9Q5JTB6 97 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 PRAMEF5Q5TYX0 476 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 BRD3OSQ6XYD6 125 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 TCF23Q7RTU1 214 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 ABHD12Q8N2K0 398 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 OR11H6Q8NGC7 330 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 OR52M1Q8NGK5 317 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 OR5H6Q8NGV6 325 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 RFESDQ8TAC1 157 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 NDNFQ8TB73 568 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 SETD6Q8TBK2 473 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 MRPL30Q8TCC3 161 aaKnown RBP9.67□□□□□ -0.86
SNCA-202ENST00000345009 DYRK2Q92630 601 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 GALMQ96C23 342 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 ISOC1Q96CN7 298 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 CLEC7AQ9BXN2 247 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 ABCG5Q9H222 651 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 TAF9BQ9HBM6 251 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 MBNL3Q9NUK0 354 aaKnown RBP9.67□□□□□ -0.86
SNCA-202ENST00000345009 COMMD3Q9UBI1 195 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 AK3Q9UIJ7 227 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 ATRQ13535 2644 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 TRBV6-6A0A0A6YYG2 114 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 IGHV2-26A0A0B4J1V2 119 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 TRAV39A0A0B4J263 110 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 SDCBPO00560 298 aaPredicted RBP9.66□□□□□ -0.86
SNCA-202ENST00000345009 TCF21O43680 179 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 RGS11O94810 467 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 APOA1P02647 267 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 ARG1P05089 322 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 FBP1P09467 338 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 OMGP23515 440 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 SSTR5P35346 364 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 ARHGDIBP52566 201 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 GNG2P59768 71 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 PLA2G7Q13093 441 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 PNLIPRP3Q17RR3 467 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 C17orf58Q2M2W7 97 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 C8orf86Q6ZUL3 223 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 PRR18Q8N4B5 295 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 C22orf15Q8WYQ4 148 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 KIRREL1Q96J84 757 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNCA-202ENST00000345009 GNG12Q9UBI6 72 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 RSL24D1Q9UHA3 163 aaKnown RBP9.66□□□□□ -0.86
SNCA-202ENST00000345009 TBL2Q9Y4P3 447 aaKnown RBP9.66□□□□□ -0.86
SNCA-202ENST00000345009 CEPT1Q9Y6K0 416 aa9.66□□□□□ -0.86
SNCA-202ENST00000345009 TRAV18A0A075B6X5 111 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 A0A087X0M5 115 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 A0A1B0GX30 115 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 A0A1W2PRD5 423 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 A0A1W2PRF3 423 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 A0A1W2PRM7 423 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 C12orf77C9JDV5 145 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 H3BMQ9 156 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 C15orf65H3BRN8 121 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 MFNGO00587 321 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 XRCC3O43542 346 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 HBZP02008 142 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 RCC1P18754 421 aaPredicted RBP9.65□□□□□ -0.86
SNCA-202ENST00000345009 HTR1DP28221 377 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 CD34P28906 385 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 SAA4P35542 130 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 CEACAM3P40198 252 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 KIR2DS4P43632 304 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 KLRD1Q13241 179 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 KIR2DS1Q14954 304 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 SPCS2Q15005 226 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 LTC4SQ16873 150 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 MOGAT2Q3SYC2 334 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 TMEM69Q5SWH9 247 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 MINOS1Q5TGZ0 78 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 HACD4Q5VWC8 232 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 STEAP3Q658P3 488 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 OR9G1Q8NH87 305 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 MALSU1Q96EH3 234 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 SLC6A7Q99884 636 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 ZMAT3Q9HA38 289 aaKnown RBP9.65□□□□□ -0.86
SNCA-202ENST00000345009 OR2S2Q9NQN1 319 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 CCDC59Q9P031 241 aaKnown RBP9.65□□□□□ -0.86
SNCA-202ENST00000345009 ADAM30Q9UKF2 790 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 AMMECR1Q9Y4X0 333 aaPredicted RBP9.65□□□□□ -0.86
SNCA-202ENST00000345009 MINOS1-NBL1R4GNA1 71 aa9.65□□□□□ -0.86
SNCA-202ENST00000345009 BTBD17A6NE02 478 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 FAM25AB3EWG3 89 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 FAM25CB3EWG5 89 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 FAM25GB3EWG6 89 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 TRDCB7Z8K6 153 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 F2RL2O00254 374 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 RGS5O15539 181 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 MMP23AO75900 390 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 DTYMKP23919 212 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 DLX1P56177 255 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 HTD2P86397 168 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 PRB3Q04118 309 aaPredicted RBP9.64□□□□□ -0.87
SNCA-202ENST00000345009 SRSF7Q16629 238 aaKnown RBP eCLIP9.64□□□□□ -0.87
SNCA-202ENST00000345009 Q3ZCU0 254 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms