RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 FHITP49789 147 aa15.77■□□□□ 0.11
SMC4-201ENST00000344722 ZNF124Q15973 351 aa15.77■□□□□ 0.11
SMC4-201ENST00000344722 GABRA6Q16445 453 aa15.77■□□□□ 0.11
SMC4-201ENST00000344722 MOB3AQ96BX8 217 aa15.77■□□□□ 0.11
SMC4-201ENST00000344722 PLPPR2Q96GM1 343 aa15.77■□□□□ 0.11
SMC4-201ENST00000344722 IER2Q9BTL4 223 aa15.77■□□□□ 0.11
SMC4-201ENST00000344722 IL19Q9UHD0 177 aa15.77■□□□□ 0.11
SMC4-201ENST00000344722 KLF4O43474 513 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 CA11O75493 328 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 HLA-DQA1P01909 254 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 TMEM38BQ9NVV0 291 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 SCN9AQ15858 1988 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 TMEM265A0A087WTH1 108 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 IGHV3-43A0A0B4J1X8 118 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 IGHV3-43DP0DP04 118 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 LBX1P52954 281 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 SPNS3Q6ZMD2 512 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 PRSS1P07477 247 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 IFI6P09912 130 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 G6PCP35575 357 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 WIPI1Q5MNZ9 446 aaPredicted RBP15.76■□□□□ 0.11
SMC4-201ENST00000344722 LYG1Q8N1E2 194 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 TMEM52Q8NDY8 209 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 OR52M1Q8NGK5 317 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 HEXA-AS1Q9H8Q6 139 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 RAB29O14966 203 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 SOD3P08294 240 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 TEPPQ6URK8 271 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 DTX4Q9Y2E6 619 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 ZFP30Q9Y2G7 519 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 COL4A1P02462 1669 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 PATE4P0C8F1 98 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 FOLR2P14207 255 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 CXorf67Q86X51 503 aaPredicted RBP15.76■□□□□ 0.11
SMC4-201ENST00000344722 PROCRQ9UNN8 238 aa15.76■□□□□ 0.11
SMC4-201ENST00000344722 MYOGP15173 224 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 PPP1CAP62136 330 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 WFIKKN1Q96NZ8 548 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 COL25A1Q9BXS0 654 aaPredicted RBP15.75■□□□□ 0.11
SMC4-201ENST00000344722 SAP30LQ9HAJ7 183 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 CDC42EP3Q9UKI2 254 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 PRSS12P56730 875 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 LRRC75AQ8NAA5 344 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 TAF15Q92804 592 aaKnown RBP eCLIP15.75■□□□□ 0.117e-26■■■■□ 25.9
SMC4-201ENST00000344722 IGLV1-36A0A0B4J1U3 117 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 KBTBD11O94819 623 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 RNPS1Q15287 305 aaKnown RBP15.75■□□□□ 0.11
SMC4-201ENST00000344722 LPAL2Q16609 132 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 ZNF766Q5HY98 468 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 OR5R1Q8NH85 324 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 A0A1W2PN81 502 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 HIST1H1BP16401 226 aaKnown RBP15.75■□□□□ 0.11
SMC4-201ENST00000344722 CD1BP29016 333 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 CXorf66Q5JRM2 361 aaPredicted RBP15.75■□□□□ 0.11
SMC4-201ENST00000344722 LINC01590Q5TEZ4 76 aa15.75■□□□□ 0.11
SMC4-201ENST00000344722 A0A1W2PP11 408 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 CA2P00918 260 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 GALNT14Q96FL9 552 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 RBM14Q96PK6 669 aaKnown RBP15.74■□□□□ 0.11
SMC4-201ENST00000344722 MPDU1O75352 247 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 DPF1Q92782 380 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 MISP3Q96FF7 219 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 MSGN1A6NI15 193 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 MELTFP08582 738 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 PLP1P60201 277 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 TMEM187Q14656 261 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 SELENOHQ8IZQ5 122 aaKnown RBP15.74■□□□□ 0.11
SMC4-201ENST00000344722 NDUFAF3Q9BU61 184 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 FOXJ2Q9P0K8 574 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 TRBV9A0A0B4J1U6 114 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 IGKV1-8A0A0C4DH67 115 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 HBZP02008 142 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 RAC3P60763 192 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 DMRTA1Q5VZB9 504 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 C16orf47Q6ZP98 133 aaPredicted RBP15.74■□□□□ 0.11
SMC4-201ENST00000344722 OR10D3Q8NH80 312 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 DCAF16Q9NXF7 216 aa15.74■□□□□ 0.11
SMC4-201ENST00000344722 NHSL1Q5SYE7 1610 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 RBP4P02753 201 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 NGFRP08138 427 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 HERPUD1Q15011 391 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 CLN8Q9UBY8 286 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 ADAMTSL1Q8N6G6 1762 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 A0A1B0GTI1 187 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 VEGFBP49765 207 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 FGF16O43320 207 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 RPL11P62913 178 aaKnown RBP15.73■□□□□ 0.11
SMC4-201ENST00000344722 OR2H1Q9GZK4 316 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 COL8A1P27658 744 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 SRD5A2P31213 254 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 ZXDCQ2QGD7 858 aaPredicted RBP15.73■□□□□ 0.11
SMC4-201ENST00000344722 SARGQ9BW04 601 aa15.73■□□□□ 0.11
SMC4-201ENST00000344722 CTAG1AP78358 180 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 PCOLCE2Q9UKZ9 415 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 PCM1Q15154 2024 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 TMEM14DPA8MWL7 114 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 M0R1B8 84 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 FABP2P12104 132 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 GABRG2P18507 467 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 MFAP2P55001 183 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms