RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 CD83Q01151 205 aa16.06■□□□□ 0.16
SYNE2-201ENST00000341472 HES1Q14469 280 aa16.06■□□□□ 0.16
SYNE2-201ENST00000341472 HNF4GQ14541 408 aa16.06■□□□□ 0.16
SYNE2-201ENST00000341472 SPHARQ15513 63 aa16.06■□□□□ 0.16
SYNE2-201ENST00000341472 UBALD1Q8TB05 177 aa16.06■□□□□ 0.16
SYNE2-201ENST00000341472 GFOD1Q9NXC2 390 aa16.06■□□□□ 0.16
SYNE2-201ENST00000341472 GHRLQ9UBU3 117 aa16.06■□□□□ 0.16
SYNE2-201ENST00000341472 A0A1W2PPI3 338 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 FAM90A10PA6NDY2 464 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 FAM90A7PA6NKC0 464 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 ADARB2-AS1A8MUL3 147 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 FAM90A23PA8MXZ1 464 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 GLAP06280 429 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 MGMTP16455 207 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 FUT3P21217 361 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 SYT6Q5T7P8 510 aaPredicted RBP16.05■□□□□ 0.16
SYNE2-201ENST00000341472 PRSS48Q7RTY5 328 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 MOB3BQ86TA1 216 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 LINC00311Q8N616 119 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 TMEM104Q8NE00 496 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 RAB9BQ9NP90 201 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 MOB4Q9Y3A3 225 aa16.05■□□□□ 0.16
SYNE2-201ENST00000341472 TET2Q6N021 2002 aaPredicted RBP16.04■□□□□ 0.16
SYNE2-201ENST00000341472 TCRBV4S1A1TA0A5B7 111 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 G3V4G9 280 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 CCRL2O00421 344 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 SPINT2O43291 252 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 CA11O75493 328 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 TMEM11P17152 192 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 LOXL3P58215 753 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 INSL4Q14641 139 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 C6orf183Q5T699 404 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 C8orf31Q8N9H6 132 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 OR4K15Q8NH41 348 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 TMED9Q9BVK6 235 aa16.04■□□□□ 0.16
SYNE2-201ENST00000341472 IGHV3-43A0A0B4J1X8 118 aa16.03■□□□□ 0.16
SYNE2-201ENST00000341472 C12orf77C9JDV5 145 aa16.03■□□□□ 0.16
SYNE2-201ENST00000341472 IGHV3-43DP0DP04 118 aa16.03■□□□□ 0.16
SYNE2-201ENST00000341472 GP2P55259 537 aaKnown RBP16.03■□□□□ 0.16
SYNE2-201ENST00000341472 ZNF816Q0VGE8 651 aaPredicted RBP16.03■□□□□ 0.16
SYNE2-201ENST00000341472 GPR50Q13585 617 aa16.03■□□□□ 0.16
SYNE2-201ENST00000341472 MED22Q15528 200 aa16.03■□□□□ 0.16
SYNE2-201ENST00000341472 GLT8D1Q68CQ7 371 aa16.03■□□□□ 0.16
SYNE2-201ENST00000341472 CEACAM19Q7Z692 300 aa16.03■□□□□ 0.16
SYNE2-201ENST00000341472 PHYHIPQ92561 330 aa16.03■□□□□ 0.16
SYNE2-201ENST00000341472 Q96M66 194 aa16.03■□□□□ 0.16
SYNE2-201ENST00000341472 CCDC90BQ9GZT6 254 aa16.03■□□□□ 0.16
SYNE2-201ENST00000341472 CST11Q9H112 138 aa16.03■□□□□ 0.16
SYNE2-201ENST00000341472 A0A1W2PRX2 142 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 UBE2QL1A1L167 161 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 HSD17B6O14756 317 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 IGKV1D-33P01593 117 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 IGKV1-33P01594 117 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 UBBP0CG47 229 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 IL3RAP26951 378 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 REG1BP48304 166 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 Q3ZCU0 254 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 TCTEX1D4Q5JR98 221 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 FAM27D1Q5T7N8 215 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 FAM53AQ6NSI3 398 aaPredicted RBP16.02■□□□□ 0.16
SYNE2-201ENST00000341472 LRRTM1Q86UE6 522 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 GAPTQ8N292 157 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 SVOPQ8N4V2 548 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 OR4X2Q8NGF9 303 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 SGCDQ92629 289 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 FAM46BQ96A09 425 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 GNG12Q9UBI6 72 aa16.02■□□□□ 0.16
SYNE2-201ENST00000341472 LSM2Q9Y333 95 aaKnown RBP16.02■□□□□ 0.16
SYNE2-201ENST00000341472 TGP01266 2768 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 A0A087WXM4 84 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 IGHV1-3A0A0C4DH29 117 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 PDCD6O75340 191 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 MPIG6BO95866 241 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 HBZP02008 142 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 SRMP19623 302 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 IRF3Q14653 427 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 BEAN1Q3B7T3 259 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 TMEM30BQ3MIR4 351 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 HSD17B12Q53GQ0 312 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 SAMD5Q5TGI4 173 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 SIGIRRQ6IA17 410 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 TRAT1Q6PIZ9 186 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 ZNF773Q6PK81 442 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 PRR18Q8N4B5 295 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 TSPAN14Q8NG11 270 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 OR1L1Q8NH94 360 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 KCNIP1Q9NZI2 227 aa16.01■□□□□ 0.15
SYNE2-201ENST00000341472 TSSC4Q9Y5U2 329 aaPredicted RBP16.01■□□□□ 0.15
SYNE2-201ENST00000341472 IGHV3-72A0A0B4J1Y9 119 aa16■□□□□ 0.15
SYNE2-201ENST00000341472 FGF16O43320 207 aa16■□□□□ 0.15
SYNE2-201ENST00000341472 SC5DO75845 299 aa16■□□□□ 0.15
SYNE2-201ENST00000341472 RCC1P18754 421 aaPredicted RBP16■□□□□ 0.15
SYNE2-201ENST00000341472 EBI3Q14213 229 aa16■□□□□ 0.15
SYNE2-201ENST00000341472 C1orf100Q5SVJ3 147 aa16■□□□□ 0.15
SYNE2-201ENST00000341472 C5orf56Q8N8D9 126 aa16■□□□□ 0.15
SYNE2-201ENST00000341472 UFD1Q92890 307 aa16■□□□□ 0.15
SYNE2-201ENST00000341472 ST6GALNAC6Q969X2 333 aa16■□□□□ 0.15
SYNE2-201ENST00000341472 EAF1Q96JC9 268 aaPredicted RBP16■□□□□ 0.15
SYNE2-201ENST00000341472 TAF9BQ9HBM6 251 aa16■□□□□ 0.15
SYNE2-201ENST00000341472 CT45A1Q5HYN5 189 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms