RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 MDH2P40926 338 aaKnown RBP12.37□□□□□ -0.43
TDP2-201ENST00000341060 RAB5BP61020 215 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 HABP2Q14520 560 aaPredicted RBP12.37□□□□□ -0.43
TDP2-201ENST00000341060 RHEBQ15382 184 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 MDP1Q86V88 176 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 OR1J1Q8NGS3 322 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 TREM2Q9NZC2 230 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 ERRFI1Q9UJM3 462 aaPredicted RBP12.37□□□□□ -0.43
TDP2-201ENST00000341060 A0A1B0GU03 582 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 A0A1B0GV50 99 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 ZNF98A6NK75 572 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 J3QW42 95 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 MT-CO3P00414 261 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 PTAFRP25105 342 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 PAX9P55771 341 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 SHEQ5VZ18 495 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 Q6P435 159 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 SPSB3Q6PJ21 355 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 TMEM217Q8N7C4 229 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 FER1L6-AS2Q96M78 137 aa12.37□□□□□ -0.43
TDP2-201ENST00000341060 A0A0G2JRQ6 117 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 LRP5LA4QPB2 252 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 CDRT15L2A8MXV6 281 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 NXPH3O95157 252 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 SERPINE2P07093 398 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 CEACAM1P13688 526 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 EPHA1P21709 976 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 SPATA46Q5T0L3 261 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 SP5Q6BEB4 398 aaPredicted RBP12.36□□□□□ -0.43
TDP2-201ENST00000341060 MOB1BQ7L9L4 216 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 OR10V1Q8NGI7 309 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 OR51H1Q8NH63 302 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 WDYHV1Q96HA8 205 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 ATP5SQ99766 215 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 ABHD14AQ9BUJ0 271 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 C20orf24Q9BUV8 137 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 RTL8AQ9BWD3 113 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 COA4Q9NYJ1 87 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 KIAA1456Q9P272 454 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 KIAA2026Q5HYC2 2103 aa12.36□□□□□ -0.43
TDP2-201ENST00000341060 ARGFXA6NJG6 315 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.35□□□□□ -0.43
TDP2-201ENST00000341060 IFNA4P05014 189 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 PSG2P11465 335 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 CD46P15529 392 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 SULT1A1P50225 295 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 ZNF154Q13106 437 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 TBC1D28Q2M2D7 210 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.35□□□□□ -0.43
TDP2-201ENST00000341060 Q8IYB0 196 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 SFT2D1Q8WV19 159 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 IL1F10Q8WWZ1 152 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 RARRES2Q99969 163 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 HIPK2Q9H2X6 1198 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 RBFOX3A6NFN3 312 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 KIAA1324LA8MWY0 1029 aaPredicted RBP12.35□□□□□ -0.43
TDP2-201ENST00000341060 C1orf196B1AJZ1 125 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 IGLV2-14P01704 120 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 OR13C7P0DN81 318 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 CCL20P78556 96 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 RUNX1Q01196 453 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 WDR86Q86TI4 376 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 STX12Q86Y82 276 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 CD300LFQ8TDQ1 290 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 ISOC2Q96AB3 205 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 GPR146Q96CH1 333 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 OR1A1Q9P1Q5 309 aa12.35□□□□□ -0.43
TDP2-201ENST00000341060 PCNX2A6NKB5 2137 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 SLC33A1O00400 549 aaPredicted RBP12.34□□□□□ -0.43
TDP2-201ENST00000341060 ZNF14P17017 642 aaPredicted RBP12.34□□□□□ -0.43
TDP2-201ENST00000341060 ERVK11-1P61568 191 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 SOHLH1Q5JUK2 328 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 ZNF497Q6ZNH5 498 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 ZNF295-AS1Q8N0V1 137 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 LSM10Q969L4 123 aaKnown RBP12.34□□□□□ -0.43
TDP2-201ENST00000341060 RAB40CQ96S21 281 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 DEFB127Q9H1M4 99 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 SPRR3Q9UBC9 169 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 GTF3C1Q12789 2109 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 TRGV5A0A0B4J1U4 118 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 A0A1W2PR80 420 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 TXNL1O43396 289 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 SMPD2O60906 423 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 DFFBO76075 338 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 TNFSF15O95150 251 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 OR2H2O95918 312 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 DAOP14920 347 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 RPL23AP62750 156 aaKnown RBP12.34□□□□□ -0.43
TDP2-201ENST00000341060 TESK1Q15569 626 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 IGFBP7Q16270 282 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 DPPA3Q6W0C5 159 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 MYPOPQ86VE0 399 aaPredicted RBP12.34□□□□□ -0.43
TDP2-201ENST00000341060 SCCPDHQ8NBX0 429 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 C12orf57Q99622 126 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 UNKLQ9H9P5 680 aaKnown RBP12.34□□□□□ -0.43
TDP2-201ENST00000341060 POLDIP2Q9Y2S7 368 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 WSB1Q9Y6I7 421 aa12.34□□□□□ -0.43
TDP2-201ENST00000341060 A0A1W2PPH5 198 aa12.33□□□□□ -0.44
TDP2-201ENST00000341060 IGKV1-39P01597 117 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms