RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PRF1P14222 555 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 MDH2P40926 338 aaKnown RBP11.37□□□□□ -0.59
USP47-202ENST00000339865 SYT8Q8NBV8 401 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 OR10AG1Q8NH19 301 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 R3HDM4Q96D70 268 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 MS4A3Q96HJ5 214 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 HLA-DRB1P01911 266 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 MAJINQ3KP22 176 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 MS4A6EQ96DS6 147 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 RAB1BQ9H0U4 201 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 TRAV12-3A0A0B4J271 114 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 TMIGD3P0DMS9 266 aaPredicted RBP11.36□□□□□ -0.59
USP47-202ENST00000339865 TFPI2P48307 235 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 SHPRHQ149N8 1683 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 TANC2Q9HCD6 1990 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 SUMO2P61956 95 aaKnown RBP11.36□□□□□ -0.59
USP47-202ENST00000339865 TEX29Q8N6K0 151 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 SARAFQ96BY9 339 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 PRELID3AQ96N28 172 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 SLC25A19Q9HC21 320 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 ABLIM3O94929 683 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 MMP16P51512 607 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 GGTLC2Q14390 218 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 OR5AN1Q8NGI8 311 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 OTOSQ8NHW6 89 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 C16orf92Q96LL3 132 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 OR2V2Q96R30 315 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 GPR27Q9NS67 375 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 C19orf53Q9UNZ5 99 aaPredicted RBP11.36□□□□□ -0.59
USP47-202ENST00000339865 DXOO77932 396 aaKnown RBP11.36□□□□□ -0.59
USP47-202ENST00000339865 FAHD1Q6P587 224 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 OR1P1Q8NH06 330 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 RGPD1P0DJD0 1748 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 HBZP02008 142 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 SMAD4Q13485 552 aaKnown RBP11.36□□□□□ -0.59
USP47-202ENST00000339865 LHFPL5Q8TAF8 219 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 MRGPRX4Q96LA9 322 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 FLRT3Q9NZU0 649 aa11.36□□□□□ -0.59
USP47-202ENST00000339865 RCC2Q9P258 522 aaKnown RBP11.36□□□□□ -0.59
USP47-202ENST00000339865 MRGPRFQ96AM1 343 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 METTL1Q9UBP6 276 aaKnown RBP11.35□□□□□ -0.59
USP47-202ENST00000339865 KCNK7Q9Y2U2 307 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 SPCS1Q9Y6A9 102 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 P2RY1P47900 373 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 CLDN10P78369 228 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 TM4SF20Q53R12 229 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 MRPL18Q9H0U6 180 aaKnown RBP11.35□□□□□ -0.59
USP47-202ENST00000339865 RIPPLY3P57055 190 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 ZNF770Q6IQ21 691 aaPredicted RBP11.35□□□□□ -0.59
USP47-202ENST00000339865 DNASE2BQ8WZ79 361 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 SLC17A5Q9NRA2 495 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 CCL2P13500 99 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 KIR3DX1Q9H7L2 352 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 SLC25A37Q9NYZ2 338 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 INSIG2Q9Y5U4 225 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 KCNMB2Q9Y691 235 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 RGPD5Q99666 1765 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 TMEM189A5PLL7 270 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 TMEM189-UBE2V1I3L0A0 370 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 EPPINO95925 133 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 WDR38Q5JTN6 314 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 MBNL2Q5VZF2 373 aaKnown RBP11.35□□□□□ -0.59
USP47-202ENST00000339865 WDR25Q64LD2 544 aaPredicted RBP11.35□□□□□ -0.59
USP47-202ENST00000339865 TEPPQ6URK8 271 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 ASCL4Q6XD76 172 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 PARLQ9H300 379 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 OR51M1Q9H341 326 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 SIGLEC5O15389 551 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 SIGLEC14Q08ET2 396 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 FAM209AQ5JX71 171 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
USP47-202ENST00000339865 BIVMQ86UB2 503 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 ST6GAL2Q96JF0 529 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 TBX21Q9UL17 535 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 CLDN16Q9Y5I7 305 aa11.35□□□□□ -0.59
USP47-202ENST00000339865 PAXXQ9BUH6 204 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 NTMQ9P121 344 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 SPATA31D1Q6ZQQ2 1576 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 ID1P41134 155 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 CRYBB2P43320 205 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 ANKRD37Q7Z713 158 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 MRPL30Q8TCC3 161 aaKnown RBP11.34□□□□□ -0.59
USP47-202ENST00000339865 TBC1D29Q9UFV1 150 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 TRAV8-6A0A0B4J262 113 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 APOMO95445 188 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 CCR5P51681 352 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 OR4D9Q8NGE8 314 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 PCGF1Q9BSM1 259 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 SNED1Q8TER0 1413 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 A0A087WUJ7 227 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 RAG2P55895 527 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 TNFAIP6P98066 277 aaPredicted RBP11.34□□□□□ -0.59
USP47-202ENST00000339865 OR4D5Q8NGN0 318 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 SLIT3O75094 1523 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 PSMB11A5LHX3 300 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 SHISA8B8ZZ34 492 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 F2RL2O00254 374 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 FGF17O60258 216 aa11.34□□□□□ -0.59
USP47-202ENST00000339865 PSG6Q00889 435 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms