RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 OR8U9P0C7N5 309 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 IGHV3-43DP0DP04 118 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 PSG2P11465 335 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 SSTR5P35346 364 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 OR3A1P47881 315 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 HLA-DRB3P79483 266 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 CCL8P80075 99 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 FGL1Q08830 312 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 EDDM3AQ14507 147 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 GNMTQ14749 295 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 ACOT7LQ6ZUV0 252 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 LINC00596Q86U02 117 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 Q8IYB0 196 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 FGFRL1Q8N441 504 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 KCNRGQ8N5I3 272 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 DEFB108BQ8NET1 73 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 OR8U1Q8NH10 309 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 LILRB1Q8NHL6 650 aaPredicted RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 PIK3IP1Q96FE7 263 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 BSCL2Q96G97 398 aaPredicted RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 CXorf58Q96LI9 332 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 KCNIP3Q9Y2W7 256 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 MAB21L2Q9Y586 359 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 FLNCQ14315 2725 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 A0A0B4J2A0 478 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 KIR2DS1A0A191URI9 304 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 HSPA12AO43301 675 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 MBPP02686 304 aaPredicted RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 CEACAM6P40199 344 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 KIR2DS4P43632 304 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 GABRA2P47869 451 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 UCP3P55916 312 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 KIR2DS1Q14954 304 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 LTC4SQ16873 150 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 EIF2S3LQ2VIR3 472 aaKnown RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 TMEM268Q5VZI3 342 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 THOC7Q6I9Y2 204 aaKnown RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 LIAT1Q6ZQX7 453 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 OR52L2PQ8NGH6 319 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 C18orf12Q96KH6 178 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 ZNF471Q9BX82 626 aaPredicted RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 GSX2Q9BZM3 304 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 SHPKQ9UHJ6 478 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 PPP1R3CQ9UQK1 317 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 OR2W1Q9Y3N9 320 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 LSM5Q9Y4Y9 91 aaKnown RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 UTP20O75691 2785 aaKnown RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 MED13LQ71F56 2210 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 CSMD2Q7Z408 3487 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 IGLV3-9A0A075B6K5 115 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 TRBV6-6A0A0A6YYG2 114 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 A0A1B0GWJ7 208 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 NKX2-6A6NCS4 301 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 C12orf77C9JDV5 145 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 PGLYRP1O75594 196 aaPredicted RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 CYB5R3P00387 301 aaPredicted RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 HEXAP06865 529 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 HOXD4P09016 255 aaPredicted RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 OMGP23515 440 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 LMO1P25800 156 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 PRDX2P32119 198 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 ECI1P42126 302 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 SRSF7Q16629 238 aaKnown RBP eCLIP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 H1FOOQ8IZA3 346 aaPredicted RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 ZNF565Q8N9K5 539 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 INO80EQ8NBZ0 244 aaPredicted RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 OR13A1Q8NGR1 328 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 ST8SIA2Q92186 375 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 MEGF10Q96KG7 1140 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 DHRS9Q9BPW9 319 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 MBNL3Q9NUK0 354 aaKnown RBP6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 JKAMPQ9P055 326 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 PFDN2Q9UHV9 154 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 IGSF10Q6WRI0 2623 aa6.2□□□□□ -1.42
SRFBP1-201ENST00000339397 ZFHX3Q15911 3703 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 A0A0G2JRQ6 117 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 F5H0A9 414 aaPredicted RBP6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 IGHV1-46P01743 117 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 NMBP08949 121 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 ASCL1P50553 236 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 OR4A4PQ8NGN8 299 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 LINC01560Q8TB33 94 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 RND1Q92730 232 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 TMEM222Q9H0R3 208 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 RIMS4Q9H426 269 aaPredicted RBP6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 GCM1Q9NP62 436 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 PCDHB10Q9UN67 800 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 ARFGEF3Q5TH69 2177 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 CELSR1Q9NYQ6 3014 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 DOCK11Q5JSL3 2073 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 SRRM5B3KS81 715 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 GPR31O00270 319 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 ZNF737O75373 536 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 OR2F2O95006 317 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 PLAUP00749 431 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 HBZP02008 142 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 OR4A8P0C604 315 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 ERVFRD-1P60508 538 aa6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 CYCSP99999 105 aaKnown RBP6.19□□□□□ -1.42
SRFBP1-201ENST00000339397 OR2F1Q13607 317 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 1072 ms