RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 C5orf24Q7Z6I8 188 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 Q8N2B8 174 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 OR52M1Q8NGK5 317 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 OR4C13Q8NGP0 309 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 KCNG3Q8TAE7 436 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 SULT4A1Q9BR01 284 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 NICN1Q9BSH3 213 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 TMEM59Q9BXS4 323 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 YTHDF1Q9BYJ9 559 aaKnown RBP12.23□□□□□ -0.45
PRKN-201ENST00000338468 NPFFR1Q9GZQ6 430 aa12.23□□□□□ -0.45
PRKN-201ENST00000338468 CA11O75493 328 aa12.22□□□□□ -0.45
PRKN-201ENST00000338468 CEACAM3P40198 252 aa12.22□□□□□ -0.45
PRKN-201ENST00000338468 HABP2Q14520 560 aaPredicted RBP12.22□□□□□ -0.45
PRKN-201ENST00000338468 Q6ZPA2 131 aa12.22□□□□□ -0.45
PRKN-201ENST00000338468 MRPL30Q8TCC3 161 aaKnown RBP12.22□□□□□ -0.45
PRKN-201ENST00000338468 CREB3L1Q96BA8 519 aa12.22□□□□□ -0.45
PRKN-201ENST00000338468 LPAR5Q9H1C0 372 aa12.22□□□□□ -0.45
PRKN-201ENST00000338468 MBNL3Q9NUK0 354 aaKnown RBP12.22□□□□□ -0.45
PRKN-201ENST00000338468 GFOD1Q9NXC2 390 aa12.22□□□□□ -0.45
PRKN-201ENST00000338468 PITPNC1Q9UKF7 332 aa12.22□□□□□ -0.45
PRKN-201ENST00000338468 TRAPPC2LQ9UL33 140 aa12.22□□□□□ -0.45
PRKN-201ENST00000338468 LRRC42Q9Y546 428 aa12.22□□□□□ -0.45
PRKN-201ENST00000338468 IGHV3-43A0A0B4J1X8 118 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 FOXI3A8MTJ6 420 aaPredicted RBP12.21□□□□□ -0.45
PRKN-201ENST00000338468 OOSP1A8MZH6 123 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 SDCBPO00560 298 aaPredicted RBP12.21□□□□□ -0.45
PRKN-201ENST00000338468 HBZP02008 142 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 IGHV3-43DP0DP04 118 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 CLDN12P56749 244 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 BLCAPP62952 87 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 NKAPLQ5M9Q1 402 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 C6orf201Q7Z4U5 140 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 SVOPQ8N4V2 548 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 FAM89BQ8N5H3 189 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 OR51D1Q8NGF3 324 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 OR1L1Q8NH94 360 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 FAAP24Q9BTP7 215 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 PLGRKTQ9HBL7 147 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 SERTAD4Q9NUC0 356 aa12.21□□□□□ -0.45
PRKN-201ENST00000338468 TRAV1-2A0A0B4J238 106 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 TRDV1A0A1B0GX56 115 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 A0A1W2PPI3 338 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 FAM90A9PA6NNJ1 464 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 H3BUI4 141 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 LDLRAD4O15165 306 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 SLC31A2O15432 143 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 ARSBP15848 533 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 OR10A3P58181 314 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 PLA2G7Q13093 441 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 MADCAM1Q13477 382 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 RAB11BQ15907 218 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 C6orf183Q5T699 404 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 ZNF773Q6PK81 442 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 OR2W3Q7Z3T1 314 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 LINC00311Q8N616 119 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 C8orf31Q8N9H6 132 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 ZNF439Q8NDP4 499 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 OR2T6Q8NHC8 308 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 CFHR4Q92496 578 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 TOMM40LQ969M1 308 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 RPEQ96AT9 228 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 NEDD4LQ96PU5 975 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 AMMECR1Q9Y4X0 333 aaPredicted RBP12.2□□□□□ -0.46
PRKN-201ENST00000338468 V9GY05 133 aa12.2□□□□□ -0.46
PRKN-201ENST00000338468 CCRL2O00421 344 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 TIMM23O14925 209 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 SOCS1O15524 211 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 AMY1AP04745 511 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 AMY2AP04746 511 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 BRS3P32247 399 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 ZNF134P52741 427 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 TMEM50BP56557 158 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 HIST2H2BDQ6DRA6 164 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 CCDC144NLQ6NUI1 221 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 NR2C2APQ86WQ0 139 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 WIPF2Q8TF74 440 aaPredicted RBP12.19□□□□□ -0.46
PRKN-201ENST00000338468 ST6GALNAC6Q969X2 333 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 FAM3DQ96BQ1 224 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 LIN7BQ9HAP6 207 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 TAF9BQ9HBM6 251 aa12.19□□□□□ -0.46
PRKN-201ENST00000338468 WNK1Q9H4A3 2382 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 SPINT2O43291 252 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 NAPSAO96009 420 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 GALP22466 123 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 PSMB9P28065 219 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 BLVRBP30043 206 aaPredicted RBP12.18□□□□□ -0.46
PRKN-201ENST00000338468 GNMTQ14749 295 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 C2orf76Q3KRA6 126 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 Q3ZCU0 254 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 CT45A1Q5HYN5 189 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 HES5Q5TA89 166 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 C22orf42Q6IC83 251 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 ZNF880Q6PDB4 577 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 C11orf88Q6PI97 169 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 TRAT1Q6PIZ9 186 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 SLC25A48Q6ZT89 311 aaKnown RBP12.18□□□□□ -0.46
PRKN-201ENST00000338468 C16orf82Q7Z2V1 217 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 PRR18Q8N4B5 295 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 DRAM1Q8N682 238 aa12.18□□□□□ -0.46
PRKN-201ENST00000338468 KLHDC1Q8N7A1 406 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms