RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RNF122Q9H9V4 155 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 SEBOXQ9HB31 216 aaPredicted RBP11.55□□□□□ -0.56
COL2A1-201ENST00000337299 TUBD1Q9UJT1 453 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 ALG1L2C9J202 215 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 CELA2BP08218 269 aaPredicted RBP11.55□□□□□ -0.56
COL2A1-201ENST00000337299 UCP3P55916 312 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 HLA-BQ31612 363 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 Q5PR19 223 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 TMEM92Q6UXU6 159 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 C1QL2Q7Z5L3 287 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 ADIPOR1Q96A54 375 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 IMMP2LQ96T52 175 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 POU2F2P09086 479 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 GABRG2P18507 467 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 RPS4Y1P22090 263 aaKnown RBP11.54□□□□□ -0.56
COL2A1-201ENST00000337299 OTX1P32242 354 aaPredicted RBP11.54□□□□□ -0.56
COL2A1-201ENST00000337299 GPR3P46089 330 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 YRDCQ86U90 279 aaKnown RBP11.54□□□□□ -0.56
COL2A1-201ENST00000337299 VASH2Q86V25 355 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 ARL6IP6Q8N6S5 226 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 WNT10AQ9GZT5 417 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 OR6C3Q9NZP0 311 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 FAM166BA8MTA8 275 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 ZNF732B4DXR9 585 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 M0R2Z0 102 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 CD99P14209 185 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 COL9A1P20849 921 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 CLDN23Q96B33 292 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 TMEM208Q9BTX3 173 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 WDR61Q9GZS3 305 aaKnown RBP11.54□□□□□ -0.56
COL2A1-201ENST00000337299 PARLQ9H300 379 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 G6PC2Q9NQR9 355 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 AKAP6Q13023 2319 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 TDRD6O60522 2096 aaKnown RBP11.54□□□□□ -0.56
COL2A1-201ENST00000337299 TMEM14DPA8MWL7 114 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 CTSBP07858 339 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 CBLN1P23435 193 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
COL2A1-201ENST00000337299 CDH20Q9HBT6 801 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 WFDC1Q9HC57 220 aa11.54□□□□□ -0.56
COL2A1-201ENST00000337299 GJE1A6NN92 205 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 OR10J4P0C629 311 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 ERGP11308 486 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 TFF2Q03403 129 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 EGR4Q05215 589 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 SHISA5Q8N114 240 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 BOD1Q96IK1 185 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 SELENOKQ9Y6D0 94 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 A0A0G2JMZ2 1700 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 LRRC37A2A6NM11 1700 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 TDRD15B5MCY1 1934 aaKnown RBP11.53□□□□□ -0.56
COL2A1-201ENST00000337299 EIF3IQ13347 325 aaKnown RBP11.53□□□□□ -0.56
COL2A1-201ENST00000337299 HIST3H3Q16695 136 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 ZNF506Q5JVG8 444 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 OR5R1Q8NH85 324 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 WNT16Q9UBV4 365 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 MTCH2Q9Y6C9 303 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 MGAMO43451 1857 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 ACACAQ13085 2346 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 DOCK4Q8N1I0 1966 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 LNP1A1A4G5 178 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 C5orf49A4QMS7 147 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 PSG2P11465 335 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 GDF1P27539 372 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 DCDP81605 110 aaKnown RBP11.53□□□□□ -0.56
COL2A1-201ENST00000337299 FUT7Q11130 342 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 UNQ6494/PRO21346Q6UXR6 183 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 CADM4Q8NFZ8 388 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 PILRAQ9UKJ1 303 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 WIPI2Q9Y4P8 454 aa11.53□□□□□ -0.56
COL2A1-201ENST00000337299 HEATR5AQ86XA9 2040 aa11.52□□□□□ -0.56
COL2A1-201ENST00000337299 M0R1X1 148 aa11.52□□□□□ -0.56
COL2A1-201ENST00000337299 GCH1P30793 250 aa11.52□□□□□ -0.56
COL2A1-201ENST00000337299 FUT6P51993 359 aa11.52□□□□□ -0.56
COL2A1-201ENST00000337299 GNRHR2Q96P88 292 aa11.52□□□□□ -0.56
COL2A1-201ENST00000337299 UQCR10Q9UDW1 63 aa11.52□□□□□ -0.56
COL2A1-201ENST00000337299 SCN5AQ14524 2016 aa11.52□□□□□ -0.56
COL2A1-201ENST00000337299 B4E171 279 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 SUCLG1P53597 346 aaKnown RBP11.52□□□□□ -0.57
COL2A1-201ENST00000337299 ICAM4Q14773 271 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 CSRP2Q16527 193 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 AARDQ4LEZ3 155 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 VHLLQ6RSH7 139 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 RFESDQ8TAC1 157 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 SSMEM1Q8WWF3 244 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 OIT3Q8WWZ8 545 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 ANGPTL4Q9BY76 406 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 IGHV2-5P01817 119 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 CSN3P07498 182 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 HES3Q5TGS1 186 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 CHEK1O14757 476 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 CCL2P13500 99 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 GNG4P50150 75 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 UBE2NP61088 152 aaKnown RBP11.52□□□□□ -0.57
COL2A1-201ENST00000337299 TMEM187Q14656 261 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 GABRA6Q16445 453 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 RPEL1Q2QD12 228 aa11.52□□□□□ -0.57
COL2A1-201ENST00000337299 CISD2Q8N5K1 135 aaKnown RBP11.52□□□□□ -0.57
COL2A1-201ENST00000337299 FANCMQ8IYD8 2048 aa11.51□□□□□ -0.57
COL2A1-201ENST00000337299 CENPFP49454 3210 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms