RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 PATE3B3GLJ2 98 aa15.65■□□□□ 0.1
PKP3-201ENST00000331563 E9PLN8 166 aa15.65■□□□□ 0.1
PKP3-201ENST00000331563 DUX1O43812 170 aa15.65■□□□□ 0.1
PKP3-201ENST00000331563 TNFSF13O75888 250 aa15.65■□□□□ 0.1
PKP3-201ENST00000331563 GLB1P16278 677 aa15.65■□□□□ 0.1
PKP3-201ENST00000331563 GZMHP20718 246 aa15.65■□□□□ 0.1
PKP3-201ENST00000331563 FAM69BQ5VUD6 431 aa15.65■□□□□ 0.1
PKP3-201ENST00000331563 C16orf47Q6ZP98 133 aaPredicted RBP15.65■□□□□ 0.1
PKP3-201ENST00000331563 TMEM170AQ8WVE7 144 aa15.65■□□□□ 0.1
PKP3-201ENST00000331563 TMEM234Q8WY98 164 aa15.65■□□□□ 0.1
PKP3-201ENST00000331563 PRSS50Q9UI38 385 aa15.65■□□□□ 0.1
PKP3-201ENST00000331563 PIGLQ9Y2B2 252 aa15.65■□□□□ 0.1
PKP3-201ENST00000331563 PFN1P07737 140 aaKnown RBP15.64■□□□□ 0.09
PKP3-201ENST00000331563 MTCP1P56278 107 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 NSDHLQ15738 373 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 LYG1Q8N1E2 194 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 RPUSD4Q96CM3 377 aaKnown RBP15.64■□□□□ 0.09
PKP3-201ENST00000331563 ATP5SQ99766 215 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 RPRMQ9NS64 109 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 CHD3Q12873 2000 aaKnown RBP15.64■□□□□ 0.09
PKP3-201ENST00000331563 SHISA8B8ZZ34 492 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 CHST1O43916 411 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 TDGF1P13385 188 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 HIST1H3AP68431 136 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 LPAL2Q16609 132 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 DPPA3Q6W0C5 159 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 PLXDC1Q8IUK5 500 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 SSC4DQ8WTU2 575 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 ORAOV1Q8WV07 137 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 SDSLQ96GA7 329 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 RSG1Q9BU20 258 aa15.64■□□□□ 0.09
PKP3-201ENST00000331563 MPPED1O15442 326 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 SPRY1O43609 319 aaPredicted RBP15.63■□□□□ 0.09
PKP3-201ENST00000331563 ZP4Q12836 540 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 RTP5Q14D33 572 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 OR8G2PQ6IF36 304 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 SCGB1C1Q8TD33 95 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 Q96M66 194 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 GPHA2Q96T91 129 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 GPR35Q9HC97 309 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 ZNF160Q9HCG1 818 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 CPAMD8Q8IZJ3 1885 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 AQP7O14520 342 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 TIAF1O95411 115 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 TMEM50AO95807 157 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 AADACP22760 399 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 GNRHRP30968 328 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 FAM3BP58499 235 aaPredicted RBP15.63■□□□□ 0.09
PKP3-201ENST00000331563 PRSS8Q16651 343 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 RSPO4Q2I0M5 234 aaPredicted RBP15.63■□□□□ 0.09
PKP3-201ENST00000331563 BSXQ3C1V8 233 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 LYSMD4Q5XG99 296 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 SP5Q6BEB4 398 aaPredicted RBP15.63■□□□□ 0.09
PKP3-201ENST00000331563 NAT8Q9UHE5 227 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 A0A1W2PQD3 144 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 CNOT4O95628 575 aaKnown RBP15.63■□□□□ 0.09
PKP3-201ENST00000331563 IGHEP01854 428 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 CFIP05156 583 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 ZNF41P51814 821 aaPredicted RBP15.63■□□□□ 0.09
PKP3-201ENST00000331563 UCP3P55916 312 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 BAXQ07812 192 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 CST9LP1Q5W188 147 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 TGIF2LYQ8IUE0 185 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 THAP3Q8WTV1 239 aaPredicted RBP15.63■□□□□ 0.09
PKP3-201ENST00000331563 PYGO2Q9BRQ0 406 aa15.63■□□□□ 0.09
PKP3-201ENST00000331563 SEPSECSQ9HD40 501 aaKnown RBP15.63■□□□□ 0.09
PKP3-201ENST00000331563 SRPXP78539 464 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 ACOT6Q3I5F7 207 aaPredicted RBP15.62■□□□□ 0.09
PKP3-201ENST00000331563 CRIP3Q6Q6R5 217 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 MAML2Q8IZL2 1156 aaPredicted RBP15.62■□□□□ 0.09
PKP3-201ENST00000331563 OR51G1Q8NGK1 321 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 MS4A10Q96PG2 267 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 ZNF286AQ9HBT8 521 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 CCL1P22362 96 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 RANP62826 216 aaKnown RBP15.62■□□□□ 0.09
PKP3-201ENST00000331563 OR5T1Q8NG75 326 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 ZCCHC14Q8WYQ9 949 aaKnown RBP15.62■□□□□ 0.09
PKP3-201ENST00000331563 LYZL4Q96KX0 146 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 TECTBQ96PL2 329 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 RBKSQ9H477 322 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 C11orf1Q9H5F2 150 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 VSIRQ9H7M9 311 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 PLSCR2Q9NRY7 297 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 RNF150Q9ULK6 438 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 SDK2Q58EX2 2172 aa15.62■□□□□ 0.09
PKP3-201ENST00000331563 IGHG1P01857 330 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 TMEM267Q0VDI3 215 aaPredicted RBP15.61■□□□□ 0.09
PKP3-201ENST00000331563 PDCD1Q15116 288 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 ZNF721Q8TF20 911 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 NAT6Q93015 286 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 MOB3AQ96BX8 217 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 TMEM222Q9H0R3 208 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 RPH3ALQ9UNE2 315 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 TRAV1-1A0A0B4J248 108 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 OR2J2O76002 312 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 NDUFB8O95169 186 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 DDAH2O95865 285 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 IFNA1P01562 189 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 S100A7P31151 101 aa15.61■□□□□ 0.09
PKP3-201ENST00000331563 UBE2V1Q13404 147 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms