RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 C20orf196Q8IYI0 205 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 TCTEX1D1Q8N7M0 179 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 OR2M3Q8NG83 312 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 FGF14Q92915 247 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 ST6GALNAC5Q9BVH7 336 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 ANAPC10Q9UM13 185 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF732B4DXR9 585 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 PITX3O75364 302 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 IGKV1D-16P01601 117 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 CYC1P08574 325 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 DRD3P35462 400 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 DNASE1L1P49184 302 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 MRPS34P82930 218 aaKnown RBP10.22□□□□□ -0.77
SHMT2-201ENST00000328923 ODF1Q14990 250 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 MEP1BQ16820 701 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 PLAC9Q5JTB6 97 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 VASH2Q86V25 355 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 LGI3Q8N145 548 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 SIGLECL1Q8N7X8 197 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 OR2Y1Q8NGV0 311 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 TSPAN32Q96QS1 320 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 MMP25Q9NPA2 562 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 TMEM38BQ9NVV0 291 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 SCN2AQ99250 2005 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 A0A0A6YYD4 124 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 TRAV8-6A0A0B4J262 113 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 ST8SIA3O43173 380 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 TRAF3IP2O43734 574 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-201ENST00000328923 NPIPB7O75200 414 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 HPNP05981 417 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 GLI4P10075 376 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 SCGB1A1P11684 91 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 WASP42768 502 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 CLDN15P56746 228 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 POU3F1Q03052 451 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-201ENST00000328923 SLC18B1Q6NT16 456 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 KCNIP4Q6PIL6 250 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 OR2C3Q8N628 320 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 OR1K1Q8NGR3 316 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 ELSPBP1Q96BH3 223 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 OR2A5Q96R48 311 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 RPP25Q9BUL9 199 aaKnown RBP10.22□□□□□ -0.77
SHMT2-201ENST00000328923 FBLN5Q9UBX5 448 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 B9D1Q9UPM9 204 aa10.22□□□□□ -0.77
SHMT2-201ENST00000328923 TRPM6Q9BX84 2022 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 FOXS1O43638 330 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 KBTBD11O94819 623 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 MSR1P21757 451 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 UCP1P25874 307 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 LHX2P50458 406 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 CKS1BP61024 79 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 LCN2P80188 198 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 QRFPP83859 136 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 MPV17L2Q567V2 206 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 KCTD18Q6PI47 426 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-201ENST00000328923 BAGE3Q86Y29 109 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 BAGE2Q86Y30 109 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 PNKDQ8N490 385 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 OR5C1Q8NGR4 320 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 PLPPR1Q8TBJ4 325 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 DOK4Q8TEW6 326 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 SPACA9Q96E40 222 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-201ENST00000328923 POM121L2Q96KW2 1035 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 FOXN4Q96NZ1 517 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 ZDHHC11Q9H8X9 412 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 PHPT1Q9NRX4 125 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-201ENST00000328923 CLEC1BQ9P126 229 aa10.21□□□□□ -0.77
SHMT2-201ENST00000328923 TRAV1-1A0A0B4J248 108 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 SOCS1O15524 211 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 CST7O76096 145 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 ISG15P05161 165 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 WNT2P09544 360 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 IGLC1P0CG04 106 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 S100GP29377 79 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 GPR6P46095 362 aaPredicted RBP10.21□□□□□ -0.78
SHMT2-201ENST00000328923 EMP2P54851 167 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 CSNK2A1P68400 391 aaPredicted RBP10.21□□□□□ -0.78
SHMT2-201ENST00000328923 RPL18Q07020 188 aaKnown RBP10.21□□□□□ -0.78
SHMT2-201ENST00000328923 PSG3Q16557 428 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 SULF2Q8IWU5 870 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 OR8I2Q8N0Y5 310 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 CSNK2A3Q8NEV1 391 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 ANAPC16Q96DE5 110 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 P2RX4Q99571 388 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 AGMATQ9BSE5 352 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 TMEM74BQ9NUR3 256 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 HHLA2Q9UM44 414 aa10.21□□□□□ -0.78
SHMT2-201ENST00000328923 TBL2Q9Y4P3 447 aaKnown RBP10.21□□□□□ -0.78
SHMT2-201ENST00000328923 DOCK11Q5JSL3 2073 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 ALG1L2C9J202 215 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 CDIPTO14735 213 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 TNFSF14O43557 240 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 SLC35E2P0CK97 266 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 CRISP2P16562 243 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 KITLGP21583 273 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 SLC6A8P48029 635 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 DYNLT3P51808 116 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 CST6Q15828 149 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.2□□□□□ -0.78
SHMT2-201ENST00000328923 PRAMEF5Q5TYX0 476 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms