RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.41
TPM3-205ENST00000328159 MEX3BQ6ZN04 569 aaKnown RBP12.52□□□□□ -0.41
TPM3-205ENST00000328159 LILRB1Q8NHL6 650 aaPredicted RBP12.52□□□□□ -0.41
TPM3-205ENST00000328159 SHARPINQ9H0F6 387 aa12.52□□□□□ -0.41
TPM3-205ENST00000328159 PRORYQ9H606 182 aa12.52□□□□□ -0.41
TPM3-205ENST00000328159 OR5AC2Q9NZP5 309 aa12.52□□□□□ -0.41
TPM3-205ENST00000328159 NCOR2Q9Y618 2525 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 IGHV3OR15-7A0A075B7D8 119 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 CCL21O00585 134 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 ZNF737O75373 536 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 PGLYRP1O75594 196 aaPredicted RBP12.51□□□□□ -0.41
TPM3-205ENST00000328159 B3GALNT1O75752 331 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 HEXAP06865 529 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 OR4A8P0C604 315 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 S100GP29377 79 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 GABRA2P47869 451 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 PAX5Q02548 391 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 TMEM268Q5VZI3 342 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 BVESQ8NE79 360 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 OR1S1Q8NH92 325 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 OR1L1Q8NH94 360 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 TMEM56Q96MV1 263 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 CNTNAP3BQ96NU0 1288 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 GPHA2Q96T91 129 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 CNTNAP3Q9BZ76 1288 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 RNF7Q9UBF6 113 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 TMEM56-RWDD3S4R434 201 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 PIEZO1Q92508 2521 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 KCNAB3O43448 404 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 CEACAM6P40199 344 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 GLIPR1P48060 266 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 UBA52P62987 128 aaKnown RBP12.51□□□□□ -0.41
TPM3-205ENST00000328159 CLLU1Q5K131 121 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 C6orf183Q5T699 404 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 ADAM5Q6NVV9 412 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 FAM219AQ8IW50 185 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 SLC35G3Q8N808 338 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 RRNAD1Q96FB5 475 aaKnown RBP12.51□□□□□ -0.41
TPM3-205ENST00000328159 DNTTIP1Q9H147 329 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 GCM1Q9NP62 436 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 TMED3Q9Y3Q3 217 aa12.51□□□□□ -0.41
TPM3-205ENST00000328159 RPS10-NUDT3A0A1W2PQS6 291 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 TNFSF12O43508 249 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 UCP1P25874 307 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 CHRNB4P30926 498 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 IL2RGP31785 369 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 CD80P33681 288 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 NUP62P37198 522 aaPredicted RBP12.5□□□□□ -0.41
TPM3-205ENST00000328159 RAB14P61106 215 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 FBXL19-AS1Q494R0 122 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 ZNF695Q8IW36 515 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 SELENOHQ8IZQ5 122 aaKnown RBP12.5□□□□□ -0.41
TPM3-205ENST00000328159 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
TPM3-205ENST00000328159 PPP1R35Q8TAP8 253 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 MRGPRDQ8TDS7 321 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 ERGIC1Q969X5 290 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 GALMQ96C23 342 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 SNX22Q96L94 193 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 LURAP1Q96LR2 239 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 DIRC2Q96SL1 478 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 GSX2Q9BZM3 304 aa12.5□□□□□ -0.41
TPM3-205ENST00000328159 PARP12Q9H0J9 701 aaKnown RBP12.5□□□□□ -0.41
TPM3-205ENST00000328159 ESRP2Q9H6T0 727 aaKnown RBP12.5□□□□□ -0.41
TPM3-205ENST00000328159 CACNA1DQ01668 2161 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 FAM90A27PA6NNH2 459 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 VSTM5A8MXK1 200 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 H0Y980 276 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 SPDEFO95238 335 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 HBZP02008 142 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 ADH4P08319 380 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 NCMAPQ5T1S8 102 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 FOXRED2Q8IWF2 684 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 TPRX1Q8N7U7 411 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 OR13A1Q8NGR1 328 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 Q8TCH9 128 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 SCARB1Q8WTV0 552 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 FAM222BQ8WU58 562 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 ST8SIA2Q92186 375 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 AKR1E2Q96JD6 320 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 ARPC5LQ9BPX5 153 aa12.49□□□□□ -0.41
TPM3-205ENST00000328159 RBM7Q9Y580 266 aaKnown RBP12.49□□□□□ -0.41
TPM3-205ENST00000328159 LINC00862A6NCI5 91 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 TUBAL3A6NHL2 446 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 CDS2O95674 445 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 SCGB1D2O95969 90 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 IGLV2-14P01704 120 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 CD55P08174 381 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 WNT2P09544 360 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 SFTPCP11686 197 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 F2RP25116 425 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 EDDM3AQ14507 147 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 SMCO1Q147U7 214 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 ESCO2Q56NI9 601 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 FAM201AQ5SY85 155 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 TRAT1Q6PIZ9 186 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 ALKAL2Q6UX46 152 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 OR5D13Q8NGL4 314 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 ANGPTL6Q8NI99 470 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 RNASE6Q93091 150 aaKnown RBP12.48□□□□□ -0.41
TPM3-205ENST00000328159 AQP10Q96PS8 301 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms