RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TREM2Q9NZC2 230 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 J3KRW8 73 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 HPRT1P00492 218 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 HIKESHIQ53FT3 197 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 CCDC144NLQ6NUI1 221 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 IL19Q9UHD0 177 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 H3BVH4 76 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 NAAAQ02083 359 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 ZNF79Q15937 498 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 PAXXQ9BUH6 204 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 A0A1W2PPV9 198 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 APOBEC4Q8WW27 367 aaKnown RBP18.36■□□□□ 0.53
RNF40-201ENST00000324685 ADAT3Q96EY9 351 aaPredicted RBP18.36■□□□□ 0.53
RNF40-201ENST00000324685 ZNF250P15622 560 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 SERF2P84101 59 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 RGP1Q92546 391 aaPredicted RBP18.36■□□□□ 0.53
RNF40-201ENST00000324685 EML2O95834 649 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 RNF224P0DH78 156 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 ZP4Q12836 540 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 FBXW9Q5XUX1 488 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 ABHD3Q8WU67 409 aa18.36■□□□□ 0.53
RNF40-201ENST00000324685 ZNF71Q9NQZ8 489 aaPredicted RBP18.36■□□□□ 0.53
RNF40-201ENST00000324685 TEX30Q5JUR7 227 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 LRRC3BQ96PB8 259 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 UBTD1Q9HAC8 227 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 MIOXQ9UGB7 285 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 BCL2P10415 239 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 ARID1BQ8NFD5 2236 aaPredicted RBP18.35■□□□□ 0.53
RNF40-201ENST00000324685 WNT5AP41221 380 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 OR1K1Q8NGR3 316 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 DIRC3C9JPN6 131 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 M0R3E3 92 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 HRKO00198 91 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 ZNF25P17030 456 aaPredicted RBP18.35■□□□□ 0.53
RNF40-201ENST00000324685 CD1BP29016 333 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 EFNB2P52799 333 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 C19orf57Q0VDD7 668 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 VN1R17PQ8TDU5 208 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 TP53RKQ96S44 253 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 R4GN57 208 aa18.35■□□□□ 0.53
RNF40-201ENST00000324685 SPINK2P20155 84 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 KIR3DL2P43630 455 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 COL10A1Q03692 680 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 SPANXN1Q5VSR9 72 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 ZAR1Q86SH2 424 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 UCN2Q96RP3 112 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 AESQ08117 197 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 TMEM140Q9NV12 185 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 PTP4A3O75365 173 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 FCGR3AP08637 254 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 C9orf40Q8IXQ3 194 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 DYNLRB2Q8TF09 96 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 CLN8Q9UBY8 286 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 MGAT2Q10469 447 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 WIPI2Q9Y4P8 454 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 RAB29O14966 203 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 FSTP19883 344 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 KCNMB1Q16558 191 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 OR4C12Q96R67 309 aa18.34■□□□□ 0.53
RNF40-201ENST00000324685 SLC25A10Q9UBX3 287 aaPredicted RBP18.34■□□□□ 0.53
RNF40-201ENST00000324685 IGHV3OR15-7A0A075B7D8 119 aa18.33■□□□□ 0.53
RNF40-201ENST00000324685 IGHV5-10-1A0A0J9YXX1 117 aa18.33■□□□□ 0.53
RNF40-201ENST00000324685 ZNF137PP52743 207 aa18.33■□□□□ 0.53
RNF40-201ENST00000324685 LRRC75BQ2VPJ9 315 aa18.33■□□□□ 0.53
RNF40-201ENST00000324685 VAX1Q5SQQ9 334 aa18.33■□□□□ 0.53
RNF40-201ENST00000324685 C7orf66A4D0T2 115 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 HYPMO75409 117 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 NSUN5P2Q63ZY6 315 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 PRNTQ86SH4 94 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 MDP1Q86V88 176 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 OR2I1PQ8NGU4 316 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 P2RX4Q99571 388 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 IGSF11Q5DX21 431 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 RABAC1Q9UI14 185 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 OR4C46A6NHA9 309 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 ZNF205O95201 554 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 ADAMTS17Q8TE56 1095 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 ZNF721Q8TF20 911 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 NPVFQ9HCQ7 196 aa18.33■□□□□ 0.52
RNF40-201ENST00000324685 CYB5R3P00387 301 aaPredicted RBP18.32■□□□□ 0.52
RNF40-201ENST00000324685 ELF5Q9UKW6 265 aaPredicted RBP18.32■□□□□ 0.52
RNF40-201ENST00000324685 PAM16Q9Y3D7 125 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 ECM29Q5VYK3 1845 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 KIAA1551Q9HCM1 1747 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 ZNF735P0CB33 412 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 HTN1P15515 57 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 GZMMP51124 257 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 MMDQ15546 238 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 ZNF841Q6ZN19 808 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 A0A0U1RQV5 110 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 HSF4Q9ULV5 492 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 CCL4P13236 92 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 GHITMQ9H3K2 345 aa18.32■□□□□ 0.52
RNF40-201ENST00000324685 ADAMTSL3P82987 1691 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 NHSQ6T4R5 1651 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 MT-ND6P03923 174 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 SRSF5Q13243 272 aaKnown RBP18.31■□□□□ 0.52
RNF40-201ENST00000324685 ZNF273Q14593 569 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 LHFPL5Q8TAF8 219 aa18.31■□□□□ 0.52
RNF40-201ENST00000324685 DIRC2Q96SL1 478 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms