RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TMEM255AQ5JRV8 349 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 ARRDC1Q8N5I2 433 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 OR4P4Q8NGL7 312 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 RTN4RQ9BZR6 473 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 ZNHIT1O43257 154 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 MBPP02686 304 aaPredicted RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 FKBP2P26885 142 aaKnown RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 SPINK14Q6IE38 97 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 PRSS41Q7RTY9 318 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 MYOZ3Q8TDC0 251 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 DYNLRB2Q8TF09 96 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 TSPAN32Q96QS1 320 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 GLRX2Q9NS18 164 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 FAM157CP0CG43 387 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 TFPI2P48307 235 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 GFRA1P56159 465 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 FGF14Q92915 247 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 ANGPTL4Q9BY76 406 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 GPR27Q9NS67 375 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 ACP1P24666 158 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 MMP16P51512 607 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 ZNF418Q8TF45 676 aaPredicted RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 NRTNQ99748 197 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 PHF7Q9BWX1 381 aaPredicted RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 CA10Q9NS85 328 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 TMEM30AQ9NV96 361 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 RCC2Q9P258 522 aaKnown RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 HDGFL3Q9Y3E1 203 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 KLF9Q13886 244 aaPredicted RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 LYZL2Q7Z4W2 148 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 ADAMTS17Q8TE56 1095 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 TOGARAM1Q9Y4F4 1720 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 MTCH2Q9Y6C9 303 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 IGKV3D-15A0A087WSY6 115 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 A0A0A6YYD5 115 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 LMX1BO60663 402 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 NUDT3O95989 172 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 IGKV3-15P01624 115 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 CELA2BP08218 269 aaPredicted RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 MIXL1Q9H2W2 232 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 ZNF275Q9NSD4 429 aaPredicted RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 IGKV3D-11A0A0A0MRZ8 115 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 TRDCB7Z8K6 153 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 IGKV3-11P04433 115 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 FOXO1Q12778 655 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 SLC36A1Q7Z2H8 476 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 TDHQ8IZJ6 230 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 UQCR10Q9UDW1 63 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 KBTBD11O94819 623 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 TSPAN13O95857 204 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 KLF3P57682 345 aaPredicted RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 RELQ04864 619 aaPredicted RBP6.97□□□□□ -1.29
CIITA-201ENST00000324288 IZUMO4Q1ZYL8 232 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 OR1P1Q8NH06 330 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 TEX101Q9BY14 249 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 PIPOXQ9P0Z9 390 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 CACNA1AO00555 2505 aa6.97□□□□□ -1.29
CIITA-201ENST00000324288 C1QL1O75973 258 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 RAE1P78406 368 aaKnown RBP6.96□□□□□ -1.29
CIITA-201ENST00000324288 DPTQ07507 201 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 ZNF506Q5JVG8 444 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 TMEM240Q5SV17 173 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 C1QL3Q5VWW1 255 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 TMUB1Q9BVT8 246 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 DOCK1Q14185 1865 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 A0A1W2PPE3 182 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 CEACAM5P06731 702 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 CRHP06850 196 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 CTLA4P16410 223 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 BRS3P32247 399 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 SH2D5Q6ZV89 423 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 SGMS2Q8NHU3 365 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 PIK3IP1Q96FE7 263 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 ZFP30Q9Y2G7 519 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 MRPL58Q14197 206 aaKnown RBP6.96□□□□□ -1.29
CIITA-201ENST00000324288 GAPTQ8N292 157 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 RPS4Y2Q8TD47 263 aa6.96□□□□□ -1.29
CIITA-201ENST00000324288 PLA2G10O15496 165 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 REG1BP48304 166 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 PNLIPRP2P54317 469 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 MFAP2P55001 183 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 NAAAQ02083 359 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 IGFBP7Q16270 282 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 GRAMD2BQ96HH9 432 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 ZNF32P17041 273 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 FAM3BP58499 235 aaPredicted RBP6.96□□□□□ -1.3
CIITA-201ENST00000324288 RELBQ01201 579 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 KLK15Q9H2R5 256 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 GNG3P63215 75 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 OIT3Q8WWZ8 545 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 ZG16BQ96DA0 208 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.96□□□□□ -1.3
CIITA-201ENST00000324288 ZNF324O75467 553 aaPredicted RBP6.96□□□□□ -1.3
CIITA-201ENST00000324288 COL8A1P27658 744 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 TMEM50BP56557 158 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 SOX8P57073 446 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 YBX1P67809 324 aaKnown RBP6.96□□□□□ -1.3
CIITA-201ENST00000324288 PLAURQ03405 335 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 SLC35E3Q7Z769 313 aa6.96□□□□□ -1.3
CIITA-201ENST00000324288 ZNF707Q96C28 371 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms