RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 HNF4GQ14541 408 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 Q6ZS49 121 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 ODF3L1Q8IXM7 274 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 GPR146Q96CH1 333 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 TAAR3PQ9P1P4 343 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 S100A6P06703 90 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 IAPPP10997 89 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 RND3P61587 244 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 PMP22Q01453 160 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 ID3Q02535 119 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 RNPS1Q15287 305 aaKnown RBP14.81□□□□□ -0.04
COL9A1-201ENST00000320755 ALKBH6Q3KRA9 238 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 RNFT1Q5M7Z0 435 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 C15orf54Q8N8G6 183 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 PLPPR1Q8TBJ4 325 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 TRAPPC2LQ9UL33 140 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 KLRC4-KLRK1H3BQV0 150 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 WDR1O75083 606 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 PTAFRP25105 342 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 S100GP29377 79 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 DBX2Q6ZNG2 339 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 OR2J1Q9GZK6 312 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 GRPP07492 148 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 ZNF324BQ6AW86 544 aaPredicted RBP14.8□□□□□ -0.04
COL9A1-201ENST00000320755 Q6ZRM9 215 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 THNSL2Q86YJ6 484 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 OR14J1Q9UGF5 321 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 USF3Q68DE3 2245 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 CDIPTO14735 213 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 SULT1A1P50225 295 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 UCP2P55851 309 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 AKR1C8PQ5T2L2 129 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 CXorf67Q86X51 503 aaPredicted RBP14.8□□□□□ -0.04
COL9A1-201ENST00000320755 OR1K1Q8NGR3 316 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 KLF13Q9Y2Y9 288 aaPredicted RBP14.8□□□□□ -0.04
COL9A1-201ENST00000320755 MPC1Q9Y5U8 109 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 DOCK11Q5JSL3 2073 aa14.8□□□□□ -0.04
COL9A1-201ENST00000320755 RBFOX3A6NFN3 312 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 C21orf140B9A014 251 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 H0Y980 276 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 CD59P13987 128 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 ZNF14P17017 642 aaPredicted RBP14.79□□□□□ -0.04
COL9A1-201ENST00000320755 ARG2P78540 354 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 HLA-DRB3P79483 266 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 SHEQ5VZ18 495 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 OR5D13Q8NGL4 314 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 PLK3Q9H4B4 646 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 KLF2Q9Y5W3 355 aaPredicted RBP14.79□□□□□ -0.04
COL9A1-201ENST00000320755 CFAP47Q6ZTR5 3102 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 ARHGAP21Q5T5U3 1957 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 A0A1W2PPE3 182 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 TXNL1O43396 289 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 SS18L1O75177 396 aaPredicted RBP14.79□□□□□ -0.04
COL9A1-201ENST00000320755 EIF3GO75821 320 aaKnown RBP eCLIP14.79□□□□□ -0.04
COL9A1-201ENST00000320755 LYZL6O75951 148 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 CEBPDP49716 269 aaPredicted RBP14.79□□□□□ -0.04
COL9A1-201ENST00000320755 PAX9P55771 341 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 FBXW9Q5XUX1 488 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 OR51I2Q9H344 312 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 CACNG5Q9UF02 275 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 BOD1L1Q8NFC6 3051 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 OR5B21A6NL26 309 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 OR10V1Q8NGI7 309 aa14.79□□□□□ -0.04
COL9A1-201ENST00000320755 RIMS4Q9H426 269 aaPredicted RBP14.79□□□□□ -0.04
COL9A1-201ENST00000320755 ICE1Q9Y2F5 2266 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 SPSB3Q6PJ21 355 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 SCCPDHQ8NBX0 429 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 BCL2L2Q92843 193 aaPredicted RBP14.78□□□□□ -0.04
COL9A1-201ENST00000320755 POM121Q96HA1 1249 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 RNF122Q9H9V4 155 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 SPRR3Q9UBC9 169 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 RNF150Q9ULK6 438 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 ZNF727A8MUV8 499 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 NXPH2O95156 264 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 OR2H2O95918 312 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 MT-ND4LP03901 98 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 CD46P15529 392 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 EIF2S3LQ2VIR3 472 aaKnown RBP14.78□□□□□ -0.04
COL9A1-201ENST00000320755 HES3Q5TGS1 186 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 WDR86Q86TI4 376 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 STX12Q86Y82 276 aa14.78□□□□□ -0.04
COL9A1-201ENST00000320755 H1FOOQ8IZA3 346 aaPredicted RBP14.78□□□□□ -0.04
COL9A1-201ENST00000320755 TNRC6AQ8NDV7 1962 aaKnown RBP14.78□□□□□ -0.04
COL9A1-201ENST00000320755 CEP250Q9BV73 2442 aa14.77□□□□□ -0.04
COL9A1-201ENST00000320755 TRGV5A0A0B4J1U4 118 aa14.77□□□□□ -0.04
COL9A1-201ENST00000320755 METTL15P1P0C7V9 234 aa14.77□□□□□ -0.04
COL9A1-201ENST00000320755 IL24Q13007 206 aa14.77□□□□□ -0.04
COL9A1-201ENST00000320755 OR2B11Q5JQS5 317 aa14.77□□□□□ -0.04
COL9A1-201ENST00000320755 LFNGQ8NES3 379 aa14.77□□□□□ -0.04
COL9A1-201ENST00000320755 OR1J1Q8NGS3 322 aa14.77□□□□□ -0.04
COL9A1-201ENST00000320755 RSG1Q9BU20 258 aa14.77□□□□□ -0.04
COL9A1-201ENST00000320755 COA4Q9NYJ1 87 aa14.77□□□□□ -0.04
COL9A1-201ENST00000320755 RNF115Q9Y4L5 304 aa14.77□□□□□ -0.04
COL9A1-201ENST00000320755 PRSS44E7EML9 344 aa14.77□□□□□ -0.05
COL9A1-201ENST00000320755 SRSF7Q16629 238 aaKnown RBP eCLIP14.77□□□□□ -0.05
COL9A1-201ENST00000320755 FAM53AQ6NSI3 398 aaPredicted RBP14.77□□□□□ -0.05
COL9A1-201ENST00000320755 COL27A1Q8IZC6 1860 aaPredicted RBP14.77□□□□□ -0.05
COL9A1-201ENST00000320755 J3QT63 122 aa14.77□□□□□ -0.05
COL9A1-201ENST00000320755 CDX4O14627 284 aaPredicted RBP14.77□□□□□ -0.05
COL9A1-201ENST00000320755 TFF1P04155 84 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms