RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 LRTM2Q8N967 370 aa13.17□□□□□ -0.3
CALR-201ENST00000316448 COQ2Q96H96 371 aa13.17□□□□□ -0.3
CALR-201ENST00000316448 OR10C1Q96KK4 312 aa13.17□□□□□ -0.3
CALR-201ENST00000316448 SUCNR1Q9BXA5 334 aa13.17□□□□□ -0.3
CALR-201ENST00000316448 MBD2Q9UBB5 411 aa13.17□□□□□ -0.3
CALR-201ENST00000316448 UBQLN2Q9UHD9 624 aa13.17□□□□□ -0.3
CALR-201ENST00000316448 MAB21L2Q9Y586 359 aa13.17□□□□□ -0.3
CALR-201ENST00000316448 A0A0D9SG52 128 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 RPS10-NUDT3A0A1W2PQS6 291 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 NPIPB11E5RHQ5 1161 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 DIRAS3O95661 229 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 OR5AC1P0C628 307 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 LDLRAD3Q86YD5 345 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 KCNRGQ8N5I3 272 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 Q8TCH9 128 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 C2orf50Q96LR7 162 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 VRK1Q99986 396 aaPredicted RBP13.16□□□□□ -0.3
CALR-201ENST00000316448 METTL8Q9H825 291 aaKnown RBP13.16□□□□□ -0.3
CALR-201ENST00000316448 RNF7Q9UBF6 113 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 PCDHB10Q9UN67 800 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 KCNIP3Q9Y2W7 256 aa13.16□□□□□ -0.3
CALR-201ENST00000316448 ANKHD1Q8IWZ3 2542 aaKnown RBP13.16□□□□□ -0.3
CALR-201ENST00000316448 SPTBN1Q01082 2364 aaKnown RBP13.16□□□□□ -0.3
CALR-201ENST00000316448 ZNF737O75373 536 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 TNFSF4P23510 183 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 GNRHRP30968 328 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 RND3P61587 244 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 AESQ08117 197 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 EFNB3Q15768 340 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 SWI5Q1ZZU3 235 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 ZNF672Q499Z4 452 aaPredicted RBP13.15□□□□□ -0.3
CALR-201ENST00000316448 FAM185AQ8N0U4 392 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 ZNF808Q8N4W9 903 aaPredicted RBP13.15□□□□□ -0.3
CALR-201ENST00000316448 CCDC71LQ8N9Z2 235 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 OR11L1Q8NGX0 322 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 UBALD1Q8TB05 177 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 THAP6Q8TBB0 222 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 MBNL3Q9NUK0 354 aaKnown RBP13.15□□□□□ -0.3
CALR-201ENST00000316448 PPP1R3CQ9UQK1 317 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 ARFGEF3Q5TH69 2177 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 DYSFO75923 2080 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 A0A1B0GW55 424 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 VSTM5A8MXK1 200 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 IFNL4K9M1U5 179 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 HOXB5P09067 269 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 DUX4L2P0CJ85 424 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 DUX4L3P0CJ86 424 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 DUX4L4P0CJ87 422 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 DUX4L5P0CJ88 424 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 DUX4L6P0CJ89 424 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 DUX4L7P0CJ90 424 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 LYL1P12980 280 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 AGAP20933 346 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 DUX4L9Q6RFH8 374 aaPredicted RBP13.15□□□□□ -0.3
CALR-201ENST00000316448 ACOT7LQ6ZUV0 252 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 TPRX1Q8N7U7 411 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 FAM222BQ8WU58 562 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 RNF126Q9BV68 326 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 DUX4Q9UBX2 424 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 GLS2Q9UI32 602 aa13.15□□□□□ -0.3
CALR-201ENST00000316448 ABCA4P78363 2273 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 IGKV1D-13A0A0B4J2D9 117 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 A0A1W2PPR1 153 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 B8ZZF3 427 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 H0YIZ8 118 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 B3GALNT1O75752 331 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 IGKV1-13P0DP09 117 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 OR8H3Q8N146 312 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 DEFB108BQ8NET1 73 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 ANGPTL6Q8NI99 470 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 GLYATL2Q8WU03 294 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 MSI2Q96DH6 328 aaKnown RBP13.14□□□□□ -0.31
CALR-201ENST00000316448 DIRC2Q96SL1 478 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 DNAJB11Q9UBS4 358 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 KIF25Q9UIL4 384 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 ZFYVE26Q68DK2 2539 aa13.14□□□□□ -0.31
CALR-201ENST00000316448 MEX3AA1L020 520 aaKnown RBP13.13□□□□□ -0.31
CALR-201ENST00000316448 B9A039 149 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 C1QL1O75973 258 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 RNF224P0DH78 156 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 SELLP14151 372 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 GABRA2P47869 451 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 GLIPR1P48060 266 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 AP2S1P53680 142 aaPredicted RBP13.13□□□□□ -0.31
CALR-201ENST00000316448 CLLU1Q5K131 121 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 LIAT1Q6ZQX7 453 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 SLC51BQ86UW2 128 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 FAM90A1Q86YD7 464 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 H1FOOQ8IZA3 346 aaPredicted RBP13.13□□□□□ -0.31
CALR-201ENST00000316448 ZNF843Q8N446 348 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 ERGIC1Q969X5 290 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 DSCAMO60469 2012 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 MPPED1O15442 326 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 BCL2L11O43521 198 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 HMGN3Q15651 99 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 SP6Q3SY56 376 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 GGNBP1Q5YKI7 109 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 SLC35E4Q6ICL7 350 aa13.13□□□□□ -0.31
CALR-201ENST00000316448 FAM53AQ6NSI3 398 aaPredicted RBP13.13□□□□□ -0.31
CALR-201ENST00000316448 PRSS54Q6PEW0 395 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms