RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 IL19Q9UHD0 177 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 SOX21Q9Y651 276 aaPredicted RBP6.29□□□□□ -1.4
SOX6-201ENST00000316399 IGKV3D-11A0A0A0MRZ8 115 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 ZNF883P0CG24 379 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 ZNF250P15622 560 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 CXCL2P19875 107 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 B2MP61769 119 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 RAB1CQ92928 201 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 IGKV1D-16P01601 117 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 HBZP02008 142 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 IGKV3-11P04433 115 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 MC5RP33032 325 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 RPL13AP40429 203 aaKnown RBP6.29□□□□□ -1.4
SOX6-201ENST00000316399 OPRK1P41145 380 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 VAMP3Q15836 100 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 ZNF506Q5JVG8 444 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 POC1AQ8NBT0 407 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 OR1L8Q8NGR8 309 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 LINC00470Q9BZP3 86 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 FOXQ1Q9C009 403 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 PLSCR2Q9NRY7 297 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 CLEC1BQ9P126 229 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 HSPB8Q9UJY1 196 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 WDR90Q96KV7 1748 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 LOC102723971A0A1B0GUV8 181 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 AQP7O14520 342 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 ATP6V0CP27449 155 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 HTR1DP28221 377 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 CA7P43166 264 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 PMS2P11Q13670 270 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 ZNF658BQ4V348 819 aaPredicted RBP6.29□□□□□ -1.4
SOX6-201ENST00000316399 CBLN2Q8IUK8 224 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 TMEM230Q96A57 120 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 TM2D1Q9BX74 207 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 RAB1BQ9H0U4 201 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 ZNF665Q9H7R5 613 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 TUBA4BQ9H853 241 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 GOLT1BQ9Y3E0 138 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 MRPS18BQ9Y676 258 aaKnown RBP6.29□□□□□ -1.4
SOX6-201ENST00000316399 FBLL1A6NHQ2 334 aaKnown RBP6.29□□□□□ -1.4
SOX6-201ENST00000316399 CHST1O43916 411 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 RPS20P60866 119 aaKnown RBP6.29□□□□□ -1.4
SOX6-201ENST00000316399 SIGLEC14Q08ET2 396 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 SP6Q3SY56 376 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 PLA2G2FQ9BZM2 168 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 ZMIZ1Q9ULJ6 1067 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 SIRT4Q9Y6E7 314 aaPredicted RBP6.29□□□□□ -1.4
SOX6-201ENST00000316399 IGLV3-32A0A0A0MS00 114 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 NKX2-6A6NCS4 301 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 P01737 135 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 POLR2GP62487 172 aaKnown RBP eCLIP6.29□□□□□ -1.4
SOX6-201ENST00000316399 PDZD11Q5EBL8 140 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 C9orf50Q5SZB4 431 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 FAM78BQ5VT40 261 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 C10orf113Q5VZT2 155 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 WFDC8Q8IUA0 241 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 TGIF2LYQ8IUE0 185 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 GVQW1Q8N7I0 195 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 ZNF784Q8NCA9 323 aaPredicted RBP6.29□□□□□ -1.4
SOX6-201ENST00000316399 OR2Z1Q8NG97 314 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 OR51M1Q9H341 326 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 HEXA-AS1Q9H8Q6 139 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 FAM90A9PA6NNJ1 464 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 KIAA1324LA8MWY0 1029 aaPredicted RBP6.29□□□□□ -1.4
SOX6-201ENST00000316399 H3BP45 60 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 SOCS1O15524 211 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 SEMA7AO75326 666 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 CD1BP29016 333 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 ZAR1Q86SH2 424 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 KCNK7Q9Y2U2 307 aa6.29□□□□□ -1.4
SOX6-201ENST00000316399 A0A1B0GTI1 187 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 HELTA6NFD8 242 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 DNLZQ5SXM8 178 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 ZPLD1Q8TCW7 415 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 SLC25A5P05141 298 aaKnown RBP6.28□□□□□ -1.4
SOX6-201ENST00000316399 PTGDSP41222 190 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 CT55Q8WUE5 264 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 SLC25A22Q9H936 323 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 ZSWIM8A7E2V4 1837 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 OR2T8A6NH00 312 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 RAB29O14966 203 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 LINC01565O15544 149 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 SMPD2O60906 423 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 BTF3P20290 206 aaKnown RBP6.28□□□□□ -1.4
SOX6-201ENST00000316399 NPY1RP25929 384 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 RPL29P47914 159 aaKnown RBP6.28□□□□□ -1.4
SOX6-201ENST00000316399 EFNB2P52799 333 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 RNASEKQ6P5S7 137 aaKnown RBP6.28□□□□□ -1.4
SOX6-201ENST00000316399 VHLLQ6RSH7 139 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 SDHCQ99643 169 aaPredicted RBP6.28□□□□□ -1.4
SOX6-201ENST00000316399 MRPL22Q9NWU5 206 aaKnown RBP6.28□□□□□ -1.4
SOX6-201ENST00000316399 K7ESF4 209 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 MGAT2Q10469 447 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 KRTCAP3Q53RY4 240 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 GUSBP11Q6P575 273 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 SOSTQ9BQB4 213 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 FAM103A1Q9BTL3 118 aaKnown RBP6.28□□□□□ -1.4
SOX6-201ENST00000316399 PATJQ8NI35 1801 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 LYG1Q8N1E2 194 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 MS4A5Q9H3V2 200 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms