RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TSPAN32Q96QS1 320 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 HSD17B10Q99714 261 aaKnown RBP7.19□□□□□ -1.26
VPS41-202ENST00000310301 PIPOXQ9P0Z9 390 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 CACNA1GO43497 2377 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 ZNF716A6NP11 495 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 ISLRO14498 428 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 FAM157CP0CG43 387 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 GCSHP23434 173 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 ZFP36L2P47974 494 aaKnown RBP7.18□□□□□ -1.26
VPS41-202ENST00000310301 CD226Q15762 336 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 REC114Q7Z4M0 266 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 OR4B1Q8NGF8 309 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 OR1B1Q8NGR6 318 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 SARGQ9BW04 601 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 SOD3P08294 240 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 SEC11BP0C7V7 166 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 CDKN2AP42771 156 aaKnown RBP7.18□□□□□ -1.26
VPS41-202ENST00000310301 DLX1P56177 255 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 MRPL30Q8TCC3 161 aaKnown RBP7.18□□□□□ -1.26
VPS41-202ENST00000310301 APOBEC3DQ96AK3 386 aaPredicted RBP7.18□□□□□ -1.26
VPS41-202ENST00000310301 RAB37Q96AX2 223 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 UQCR10Q9UDW1 63 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 IGSF23A1L1A6 192 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 RER1O15258 196 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 SRD5A2P31213 254 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 ZNF137PP52743 207 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 GAB4Q2WGN9 574 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 ZNF260Q3ZCT1 412 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 MUC15Q8N387 334 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 CYB561D1Q8N8Q1 229 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 HDGFL3Q9Y3E1 203 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 CYB5R3P00387 301 aaPredicted RBP7.18□□□□□ -1.26
VPS41-202ENST00000310301 SURF2Q15527 256 aaPredicted RBP7.18□□□□□ -1.26
VPS41-202ENST00000310301 TGIF1Q15583 401 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 CEACAM16Q2WEN9 425 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 ZNF770Q6IQ21 691 aaPredicted RBP7.18□□□□□ -1.26
VPS41-202ENST00000310301 LDLRAD3Q86YD5 345 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 MYOZ3Q8TDC0 251 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 ALKBH3Q96Q83 286 aaPredicted RBP7.18□□□□□ -1.26
VPS41-202ENST00000310301 TRPM6Q9BX84 2022 aa7.18□□□□□ -1.26
VPS41-202ENST00000310301 MEX3AA1L020 520 aaKnown RBP7.17□□□□□ -1.26
VPS41-202ENST00000310301 SHISA8B8ZZ34 492 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 PROB1E7EW31 1015 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 OGG1O15527 345 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 PDCD6O75340 191 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 GALNSP34059 522 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 SRP14P37108 136 aaKnown RBP7.17□□□□□ -1.26
VPS41-202ENST00000310301 KHDC3LQ587J8 217 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 TMEM171Q8WVE6 324 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 FLYWCH2Q96CP2 140 aaKnown RBP7.17□□□□□ -1.26
VPS41-202ENST00000310301 GAL3ST2Q9H3Q3 398 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 SCN5AQ14524 2016 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 ZNF646O15015 1829 aaPredicted RBP7.17□□□□□ -1.26
VPS41-202ENST00000310301 TGIF2-C20orf24A0A0A6YYL0 155 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 IGHV3-43A0A0B4J1X8 118 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 CYR61O00622 381 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 CTSVO60911 334 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 IGHV3-43DP0DP04 118 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 LYZP61626 148 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 GNG3P63215 75 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 THSD4Q6ZMP0 1018 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 LYG1Q8N1E2 194 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 MTURNQ8N3F0 131 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 BRWD1Q9NSI6 2320 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 LOC107984156A0A0G2JMH3 177 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 SOCS1O15524 211 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 COL8A1P27658 744 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 TAS2R60P59551 318 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 GNB2P62879 340 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 TCF15Q12870 199 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 C12orf54Q6X4T0 127 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 DOLPP1Q86YN1 238 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 ARL17AQ8IVW1 177 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 Q8IYB0 196 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 RFESDQ8TAC1 157 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 SCARF2Q96GP6 870 aaPredicted RBP7.17□□□□□ -1.26
VPS41-202ENST00000310301 FOXB1Q99853 325 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 GGACTQ9BVM4 153 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 MRPL13Q9BYD1 178 aaKnown RBP7.17□□□□□ -1.26
VPS41-202ENST00000310301 CHRNA10Q9GZZ6 450 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 STARD10Q9Y365 291 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 LOC389332A0A1B0GUA5 103 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 M0R3E3 92 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 PRSS23O95084 383 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 CD3EP07766 207 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 ATP6V0CP27449 155 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 MDH2P40926 338 aaKnown RBP7.17□□□□□ -1.26
VPS41-202ENST00000310301 KIR2DS2P43631 304 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 ERVFRD-1P60508 538 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 SSMEM1Q8WWF3 244 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 MOGAT1Q96PD6 335 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 MRM2Q9UI43 246 aaKnown RBP7.17□□□□□ -1.26
VPS41-202ENST00000310301 ANXA10Q9UJ72 324 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 OR2W5A6NFC9 320 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 KIAA0040Q15053 153 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 PLPPR5Q32ZL2 321 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 RGS7BPQ6MZT1 257 aaPredicted RBP7.17□□□□□ -1.26
VPS41-202ENST00000310301 LYZL2Q7Z4W2 148 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 SGMS2Q8NHU3 365 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 OIT3Q8WWZ8 545 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms