RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 OR2M7Q8NG81 312 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 RNF122Q9H9V4 155 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 GPR35Q9HC97 309 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 PLA2G3Q9NZ20 509 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 PILRAQ9UKJ1 303 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 TGIF2-C20orf24A0A0A6YYL0 155 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 MEOX1P50221 254 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 MEF2BQ02080 365 aaPredicted RBP11.2□□□□□ -0.62
COL3A1-201ENST00000304636 C21orf62-AS1Q17RA5 79 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 SEBOXQ9HB31 216 aaPredicted RBP11.2□□□□□ -0.62
COL3A1-201ENST00000304636 hADV38S2A0JD32 116 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 TCF21O43680 179 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 VSTM2AQ8TAG5 236 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 TXNDC17Q9BRA2 123 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 MEX3AA1L020 520 aaKnown RBP11.2□□□□□ -0.62
COL3A1-201ENST00000304636 IGSF23A1L1A6 192 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 ZNF785A8K8V0 405 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 ISLRO14498 428 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 GZMHP20718 246 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 MRPS11P82912 194 aaKnown RBP11.2□□□□□ -0.62
COL3A1-201ENST00000304636 RHOVQ96L33 236 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 DCAF16Q9NXF7 216 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 ARID1AO14497 2285 aa11.2□□□□□ -0.62
COL3A1-201ENST00000304636 A0A1W2PP11 408 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 A6NDN8 102 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 H0YL77 283 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 P01737 135 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 CRYBA2P53672 197 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 SLC23A3Q6PIS1 610 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 TEPPQ6URK8 271 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 WDFY1Q8IWB7 410 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 GMPPAQ96IJ6 420 aaPredicted RBP11.19□□□□□ -0.62
COL3A1-201ENST00000304636 CIDEAO60543 219 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 ORM2P19652 201 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 LINC01590Q5TEZ4 76 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 GGACTQ9BVM4 153 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 HSPB8Q9UJY1 196 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 A0A0G2JK05 382 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 KLF4O43474 513 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 SMPD2O60906 423 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 RND3P61587 244 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 LYRM7Q5U5X0 104 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 ZNF343Q6P1L6 599 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 TMEM251Q8N6I4 163 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 CISD1Q9NZ45 108 aaKnown RBP11.19□□□□□ -0.62
COL3A1-201ENST00000304636 MT-ND6P03923 174 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 SMIM17P0DL12 118 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 FAM27BQ5VT28 67 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 POC1AQ8NBT0 407 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 APCDD1LQ8NCL9 501 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 RSG1Q9BU20 258 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 AURKAIP1Q9NWT8 199 aaPredicted RBP11.19□□□□□ -0.62
COL3A1-201ENST00000304636 FZR1Q9UM11 496 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 NPTNQ9Y639 398 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 CDIPTO14735 213 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 GREM1O60565 184 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 MOSPD3O75425 235 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 HIST1H1EP10412 219 aaKnown RBP11.19□□□□□ -0.62
COL3A1-201ENST00000304636 KIR2DL1P43626 348 aaPredicted RBP11.19□□□□□ -0.62
COL3A1-201ENST00000304636 UCN2Q96RP3 112 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 RARRES2Q99969 163 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 PRNDQ9UKY0 176 aa11.19□□□□□ -0.62
COL3A1-201ENST00000304636 SUCLG1P53597 346 aaKnown RBP11.18□□□□□ -0.62
COL3A1-201ENST00000304636 PCGF1Q9BSM1 259 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 GPR61Q9BZJ8 451 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 ACTL6AO96019 429 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 S100A4P26447 101 aaKnown RBP11.18□□□□□ -0.62
COL3A1-201ENST00000304636 PLPPR5Q32ZL2 321 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 FHL5Q5TD97 284 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 TGIF2LXQ8IUE1 241 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 CSN3P07498 182 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 CD1BP29016 333 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 RIGQ13278 110 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 C1orf53Q5VUE5 145 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 OR4B1Q8NGF8 309 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 ZNF665Q9H7R5 613 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 FAM206AQ9NX38 181 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 LMX1BO60663 402 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 OR1B1Q8NGR6 318 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 HSPB9Q9BQS6 159 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 CLN8Q9UBY8 286 aa11.18□□□□□ -0.62
COL3A1-201ENST00000304636 TSPAN2O60636 221 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 IL11P20809 199 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 PPP1CCP36873 323 aaKnown RBP11.17□□□□□ -0.62
COL3A1-201ENST00000304636 GLIPR1P48060 266 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 RPL24P83731 157 aaKnown RBP11.17□□□□□ -0.62
COL3A1-201ENST00000304636 GAB4Q2WGN9 574 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 C9orf50Q5SZB4 431 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 EIF4E3Q8N5X7 224 aaKnown RBP11.17□□□□□ -0.62
COL3A1-201ENST00000304636 IL19Q9UHD0 177 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 TRBV23-1A0A0A0MS06 115 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 C4orf51C9J302 202 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 RPS11P62280 158 aaKnown RBP eCLIP11.17□□□□□ -0.62
COL3A1-201ENST00000304636 Q56UQ5 140 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 G6PC2Q9NQR9 355 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 LYZL6O75951 148 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 LIFP15018 202 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 ID4P47928 161 aa11.17□□□□□ -0.62
COL3A1-201ENST00000304636 BPIFA4PQ86YQ2 179 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms