RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 ABHD14AQ9BUJ0 271 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 A0A1W2PPV9 198 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 SNURFLB1AK76 121 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 ANKRD55Q3KP44 614 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 GABRG3Q99928 467 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 A0A1B0GV90 55 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 TNFSF14O43557 240 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 ERGP11308 486 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 ZNF250P15622 560 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 KLRB1Q12918 225 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 AURKAIP1Q9NWT8 199 aaPredicted RBP8.7□□□□□ -1.02
COL6A3-201ENST00000295550 ARHGAP32A7KAX9 2087 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 CD1AP06126 327 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 ABHD3Q8WU67 409 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 FGF14Q92915 247 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 C8orf44Q96CB5 159 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 STARD10Q9Y365 291 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 HIST1H1EP10412 219 aaKnown RBP8.7□□□□□ -1.02
COL6A3-201ENST00000295550 GALNSP34059 522 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 C19orf57Q0VDD7 668 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 FOXF1Q12946 379 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 TWIST1Q15672 202 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 COL25A1Q9BXS0 654 aaPredicted RBP8.7□□□□□ -1.02
COL6A3-201ENST00000295550 FZR1Q9UM11 496 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 MALRD1Q5VYJ5 2156 aa8.7□□□□□ -1.02
COL6A3-201ENST00000295550 CXCL3P19876 107 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 DRD3P35462 400 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 ZNF137PP52743 207 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 GGTLC2Q14390 218 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 PERPQ96FX8 193 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 ZPBPQ9BS86 351 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 COA4Q9NYJ1 87 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 RER1O15258 196 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 IL2RAP01589 272 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 HINT1P49773 126 aaPredicted RBP8.69□□□□□ -1.02
COL6A3-201ENST00000295550 OR4C3Q8NH37 302 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 OR2W1Q9Y3N9 320 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 NLRC5Q86WI3 1866 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 HTN1P15515 57 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 CDKN2AP42771 156 aaKnown RBP8.69□□□□□ -1.02
COL6A3-201ENST00000295550 CLEC18BQ6UXF7 455 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 GUCD1Q96NT3 240 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 MRM2Q9UI43 246 aaKnown RBP8.69□□□□□ -1.02
COL6A3-201ENST00000295550 B4E171 279 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 RAB33BQ9H082 229 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 PRRG2O14669 202 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 NUDT3O95989 172 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 PSG5Q15238 335 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 LYPD8Q6UX82 237 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 ZCCHC14Q8WYQ9 949 aaKnown RBP8.69□□□□□ -1.02
COL6A3-201ENST00000295550 IER2Q9BTL4 223 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 ALG1L2C9J202 215 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 LMO7DNF2Z398 122 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 TNFRSF1AP19438 455 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 GNG3P63215 75 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 VSTM2LQ96N03 204 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 CRHP06850 196 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 ADAMTS17Q8TE56 1095 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 ZNF707Q96C28 371 aaPredicted RBP8.69□□□□□ -1.02
COL6A3-201ENST00000295550 OPN4Q9UHM6 478 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 KLF13Q9Y2Y9 288 aaPredicted RBP8.69□□□□□ -1.02
COL6A3-201ENST00000295550 WDFY1Q8IWB7 410 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 CDX2Q99626 313 aaPredicted RBP8.69□□□□□ -1.02
COL6A3-201ENST00000295550 CES1P1Q9UKY3 287 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 TRDCB7Z8K6 153 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 PITX3O75364 302 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 SFTPA2Q8IWL1 248 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 SFTPA1Q8IWL2 248 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 LRRC75AQ8NAA5 344 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 IP6K3Q96PC2 410 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 FLRT3Q9NZU0 649 aa8.69□□□□□ -1.02
COL6A3-201ENST00000295550 F11RQ9Y624 299 aaKnown RBP8.69□□□□□ -1.02
COL6A3-201ENST00000295550 SPRY3O43610 288 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 LGALSLQ3ZCW2 172 aaPredicted RBP8.68□□□□□ -1.02
COL6A3-201ENST00000295550 TMEM255AQ5JRV8 349 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 TMEM136Q6ZRR5 245 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 PRR13Q9NZ81 148 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 AMMECR1Q9Y4X0 333 aaPredicted RBP8.68□□□□□ -1.02
COL6A3-201ENST00000295550 FAM157CP0CG43 387 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 ZNF345Q14585 488 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 MRGPRGQ86SM5 289 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 GPR27Q9NS67 375 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 SOX21Q9Y651 276 aaPredicted RBP8.68□□□□□ -1.02
COL6A3-201ENST00000295550 LINC00862A6NCI5 91 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 HLA-DQB1P01920 261 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 PRRX1P54821 245 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 SMAGPQ0VAQ4 97 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 TMEM65Q6PI78 240 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 NTN1O95631 604 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 CA6P23280 308 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 KIR2DL1P43626 348 aaPredicted RBP8.68□□□□□ -1.02
COL6A3-201ENST00000295550 KIR2DL2P43627 348 aaPredicted RBP8.68□□□□□ -1.02
COL6A3-201ENST00000295550 RPS4XP62701 263 aaKnown RBP8.68□□□□□ -1.02
COL6A3-201ENST00000295550 C10orf113Q5VZT2 155 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 OR11H7Q8NGC8 314 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 SORL1Q92673 2214 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 STAG3L3P0CL85 134 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 GABRG2P18507 467 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 CNTD2Q9H8S5 307 aa8.68□□□□□ -1.02
COL6A3-201ENST00000295550 MYOZ1Q9NP98 299 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms