RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 BARHL1Q9BZE3 327 aa7.59□□□□□ -1.19
HMHB1-201ENST00000289448 METTL9Q9H1A3 318 aa7.59□□□□□ -1.19
HMHB1-201ENST00000289448 DCSTAMPQ9H295 470 aa7.59□□□□□ -1.19
HMHB1-201ENST00000289448 IFT22Q9H7X7 185 aa7.59□□□□□ -1.19
HMHB1-201ENST00000289448 TMEM138Q9NPI0 162 aa7.59□□□□□ -1.19
HMHB1-201ENST00000289448 IDI2-AS1Q9NZ38 188 aa7.59□□□□□ -1.19
HMHB1-201ENST00000289448 IL36GQ9NZH8 169 aa7.59□□□□□ -1.19
HMHB1-201ENST00000289448 STUB1Q9UNE7 303 aa7.59□□□□□ -1.19
HMHB1-201ENST00000289448 ST3GAL6Q9Y274 331 aa7.59□□□□□ -1.19
HMHB1-201ENST00000289448 ZNF281Q9Y2X9 895 aa7.59□□□□□ -1.19
HMHB1-201ENST00000289448 COL7A1Q02388 2944 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 TRAV8-7A0A075B6U6 113 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 LOC100506127A0A0U1RQW1 187 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 A0A1W2PPE3 182 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 A0A1W2PPI3 338 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 OOSP1A8MZH6 123 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 GPX5O75715 221 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 OR7C1O76099 320 aaPredicted RBP7.58□□□□□ -1.2
HMHB1-201ENST00000289448 BDKRB2P30411 391 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 ZNF93P35789 620 aaPredicted RBP7.58□□□□□ -1.2
HMHB1-201ENST00000289448 GNG10P50151 68 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 LSM3P62310 102 aaKnown RBP7.58□□□□□ -1.2
HMHB1-201ENST00000289448 PPP3R1P63098 170 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 LIPKQ5VXJ0 399 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 LINC00299Q6ZSB3 139 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 CENPVQ7Z7K6 275 aaPredicted RBP7.58□□□□□ -1.2
HMHB1-201ENST00000289448 OSR2Q8N2R0 312 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 DRAM1Q8N682 238 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 OR4F17Q8NGA8 305 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 OR56B4Q8NH76 319 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 UBALD1Q8TB05 177 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 DYNC2LI1Q8TCX1 351 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 CAPSLQ8WWF8 208 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 RPEQ96AT9 228 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 CPNE2Q96FN4 548 aaPredicted RBP7.58□□□□□ -1.2
HMHB1-201ENST00000289448 AKR1E2Q96JD6 320 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 OR4F4Q96R69 305 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 OR51E2Q9H255 320 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 SSR3Q9UNL2 185 aa7.58□□□□□ -1.2
HMHB1-201ENST00000289448 TRBV5-7A0A0A0MS05 114 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 TRDV1A0A1B0GX56 115 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 A0A1W2PPK0 400 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 C15orf65H3BRN8 121 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 H3BUI4 141 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 PIN1P1O15428 100 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 SNRNP70P08621 437 aaKnown RBP7.57□□□□□ -1.2
HMHB1-201ENST00000289448 FAM106CPP0CH98 169 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 SERPINA2P20848 420 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 GALP22466 123 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 MNDAP41218 407 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 KCNJ3P48549 501 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 ARHGDIBP52566 201 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 CCDC144NLQ6NUI1 221 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 LYPD6Q86Y78 171 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 THNSL2Q86YJ6 484 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 WFDC9Q8NEX5 89 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 CCDC107Q8WV48 283 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 TOMM40LQ969M1 308 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 PHF21AQ96BD5 680 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 RBMXL1Q96E39 390 aaKnown RBP7.57□□□□□ -1.2
HMHB1-201ENST00000289448 CENPOQ9BU64 300 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 CCDC59Q9P031 241 aaKnown RBP7.57□□□□□ -1.2
HMHB1-201ENST00000289448 A3GALT2U3KPV4 340 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 NBEAL2Q6ZNJ1 2754 aa7.57□□□□□ -1.2
HMHB1-201ENST00000289448 DNAH9Q9NYC9 4486 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 PNMA8CA0A1B0GUJ8 204 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 TCRBV4S1A1TA0A5B7 111 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 MT-ND4P03905 459 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 CSTBP04080 98 aaKnown RBP7.56□□□□□ -1.2
HMHB1-201ENST00000289448 IGLL1P15814 213 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 CELP19835 753 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 FGF9P31371 208 aaPredicted RBP7.56□□□□□ -1.2
HMHB1-201ENST00000289448 LOXL3P58215 753 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 RPS25P62851 125 aaKnown RBP7.56□□□□□ -1.2
HMHB1-201ENST00000289448 MADCAM1Q13477 382 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 HNF4GQ14541 408 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 TRAM1Q15629 374 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 Q499Y3 187 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 SLC22A6Q4U2R8 563 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 YIF1BQ5BJH7 314 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 C9orf152Q5JTZ5 239 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 ATAD3CQ5T2N8 411 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 CD200R1LQ6Q8B3 271 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 ZNF497Q6ZNH5 498 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 C5orf56Q8N8D9 126 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 OR10A7Q8NGE5 316 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 OR14A2Q96R54 314 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 PCDHB16Q9NRJ7 776 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 MOB4Q9Y3A3 225 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 AMMECR1Q9Y4X0 333 aaPredicted RBP7.56□□□□□ -1.2
HMHB1-201ENST00000289448 TSSC4Q9Y5U2 329 aaPredicted RBP7.56□□□□□ -1.2
HMHB1-201ENST00000289448 TENM3Q9P273 2699 aa7.56□□□□□ -1.2
HMHB1-201ENST00000289448 IGHV3-43A0A0B4J1X8 118 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 IGHV3-72A0A0B4J1Y9 119 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 TMEM30CPA0ZSE6 113 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 LINC01548A6NM66 108 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 M0QZK8 103 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 SLC31A2O15432 143 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 IGKV1D-33P01593 117 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 IGKV1-33P01594 117 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms