RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CRYGSP22914 178 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 H3F3AP84243 136 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 JOSD1Q15040 202 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-202ENST00000273342 C10orf128Q5T292 105 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 C20orf204Q6ZNR8 217 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 ADPRHL1Q8NDY3 354 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 LHX4Q969G2 390 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 TMEM54Q969K7 222 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 SLC25A22Q9H936 323 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 ERRFI1Q9UJM3 462 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-202ENST00000273342 RNF115Q9Y4L5 304 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 A0A096LPE4 126 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 UBE2L5PA0A1B0GUS4 154 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 A0A1W2PPZ6 126 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 MAP1LC3B2A6NCE7 125 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 LRRC3CA6NJW4 275 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 ZNF737O75373 536 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 PGLYRP1O75594 196 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-202ENST00000273342 NR2C1P13056 603 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 GNB2P62879 340 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 SRPXP78539 464 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 CEACAM16Q2WEN9 425 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 FAM27BQ5VT28 67 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 ZDHHC23Q8IYP9 409 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 ZNF295-AS1Q8N0V1 137 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 DDA1Q9BW61 102 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 MAP1LC3BQ9GZQ8 125 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 PPP5D1E7EU14 171 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 ETV2O00321 342 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-202ENST00000273342 FUT6P51993 359 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 FAM3BP58499 235 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-202ENST00000273342 PMP22Q01453 160 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 TMEM211Q6ICI0 200 aa11.05□□□□□ -0.64
COL8A1-202ENST00000273342 SCGB1D1O95968 90 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 IL18BPO95998 194 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 GALR1P47211 349 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 IL24Q13007 206 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 RAB35Q15286 201 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 H1FOOQ8IZA3 346 aaPredicted RBP11.04□□□□□ -0.64
COL8A1-202ENST00000273342 SMRP1Q8NCR6 262 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 PSENENQ9NZ42 101 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 PRSS50Q9UI38 385 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 OPN1MWP04001 364 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 OPN1MW2P0DN77 364 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 OPN1MW3P0DN78 364 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 GLB1P16278 677 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 CHRNA7P36544 502 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 OR56B2PQ8NGI1 322 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 CHRNA10Q9GZZ6 450 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 SLC39A9Q9NUM3 307 aa11.04□□□□□ -0.64
COL8A1-202ENST00000273342 CISD1Q9NZ45 108 aaKnown RBP11.04□□□□□ -0.64
COL8A1-202ENST00000273342 B4DEV8 164 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 H7BYZ3 331 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 MDH2P40926 338 aaKnown RBP11.03□□□□□ -0.64
COL8A1-202ENST00000273342 BAXQ07812 192 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 EIF3IQ13347 325 aaKnown RBP11.03□□□□□ -0.64
COL8A1-202ENST00000273342 SP5Q6BEB4 398 aaPredicted RBP11.03□□□□□ -0.64
COL8A1-202ENST00000273342 OR8G5Q8NG78 346 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 ZNF576Q9H609 170 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 KCNS2Q9ULS6 477 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 TP53I11O14683 189 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 CXCL13O43927 109 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 ZIC3O60481 467 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 DFFBO76075 338 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 IGKV1D-33P01593 117 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 IGKV1-33P01594 117 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 EDN3P14138 238 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 UCP1P25874 307 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 WNT5AP41221 380 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 RND2P52198 227 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 HIST1H3AP68431 136 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 BSXQ3C1V8 233 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 OR4F5Q8NH21 305 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 OR2V1Q8NHB1 315 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 OR4C12Q96R67 309 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 OR4F4Q96R69 305 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 OR1A1Q9P1Q5 309 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 LOC400499M0QZD8 3231 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 A0A0U1RQK1 487 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 hCG_38984A0A1B0GV85 526 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 SYNGR1O43759 233 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 WDR1O75083 606 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 TRAPPC6AO75865 159 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 F2RP25116 425 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 NXPH1P58417 271 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 C21orf62-AS1Q17RA5 79 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 TMEM241Q24JQ0 296 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 AAED1Q7RTV5 226 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 HAPLN4Q86UW8 402 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 C10orf35Q96D05 121 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 OR5B12Q96R08 314 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 CDH20Q9HBT6 801 aa11.03□□□□□ -0.64
COL8A1-202ENST00000273342 RP1L1Q8IWN7 2480 aaPredicted RBP11.02□□□□□ -0.64
COL8A1-202ENST00000273342 TRBV24-1A0A075B6N3 115 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 CD300LBA8K4G0 201 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 CD81P60033 236 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 SPCS3P61009 180 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 ZXDAP98168 799 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 PNRC1Q12796 327 aaPredicted RBP11.02□□□□□ -0.65
COL8A1-202ENST00000273342 SLC10A1Q14973 349 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms