RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 SHEQ5VZ18 495 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 Q6ZSR3 168 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 PLPPR1Q8TBJ4 325 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 FAM234AQ9H0X4 552 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 KCNJ16Q9NPI9 418 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 CACFD1Q9UGQ2 172 aa14.15□□□□□ -0.14
VPS54-201ENST00000272322 ZNF727A8MUV8 499 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 P2RY1P47900 373 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 FGF8P55075 233 aaPredicted RBP14.14□□□□□ -0.15
VPS54-201ENST00000272322 SNRPEP62304 92 aaKnown RBP14.14□□□□□ -0.15
VPS54-201ENST00000272322 OR5P3Q8WZ94 311 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 RSG1Q9BU20 258 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 CACNG5Q9UF02 275 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 DEFB124Q8NES8 71 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 SLC25A40Q8TBP6 338 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 MRPL30Q8TCC3 161 aaKnown RBP14.14□□□□□ -0.15
VPS54-201ENST00000272322 SPRY4Q9C004 299 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 CDH20Q9HBT6 801 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 ZNF391Q9UJN7 358 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 C7orf77A4D0Y5 90 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 BTNL3Q6UXE8 466 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 WDR86Q86TI4 376 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 IQCF2Q8IXL9 164 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 PARP11Q9NR21 331 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 POMT1Q9Y6A1 747 aa14.14□□□□□ -0.15
VPS54-201ENST00000272322 IGKV3D-15A0A087WSY6 115 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 NAPSAO96009 420 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 KRASP01116 189 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 DANCRP0C864 163 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 ARR3P36575 388 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 PRAMEF6Q5VXH4 476 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 FBXW9Q5XUX1 488 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 OR8G2PQ6IF36 304 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 VHLLQ6RSH7 139 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 LCN15Q6UWW0 184 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 CCDC54Q8NEL0 328 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 ATP23Q9Y6H3 246 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 TACC2O95359 2948 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 SNCAP37840 140 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 CEACAM6P40199 344 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 AESQ08117 197 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 KRTAP27-1Q3LI81 207 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 BEND4Q6ZU67 534 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 SCCPDHQ8NBX0 429 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 OR5A2Q8NGI9 324 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 OR4D5Q8NGN0 318 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 ZPBPQ9BS86 351 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 KLF13Q9Y2Y9 288 aaPredicted RBP14.13□□□□□ -0.15
VPS54-201ENST00000272322 MMP24Q9Y5R2 645 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 OR2H2O95918 312 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 ZNF816Q0VGE8 651 aaPredicted RBP14.13□□□□□ -0.15
VPS54-201ENST00000272322 SPANXN5Q5MJ07 72 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 PCSK4Q6UW60 755 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 ZNF573Q86YE8 665 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 FDCSPQ8NFU4 85 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 OR10V1Q8NGI7 309 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 TMEM45BQ96B21 275 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 GPR146Q96CH1 333 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 WDYHV1Q96HA8 205 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 DCTN5Q9BTE1 182 aa14.13□□□□□ -0.15
VPS54-201ENST00000272322 CARHSP1Q9Y2V2 147 aaKnown RBP14.13□□□□□ -0.15
VPS54-201ENST00000272322 CD5P06127 495 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 ELLP55199 621 aaPredicted RBP14.12□□□□□ -0.15
VPS54-201ENST00000272322 EDDM3AQ14507 147 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 DDA1Q9BW61 102 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 GPR87Q9BY21 358 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 DUSP13Q9UII6 198 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 AKAP6Q13023 2319 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 KIR2DS1A0A191URI9 304 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 ZFP92A6NM28 416 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 MPV17P39210 176 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 KIR2DS4P43632 304 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 KIR2DS1Q14954 304 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 VWA1Q6PCB0 445 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 TREM2Q9NZC2 230 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 IL36GQ9NZH8 169 aa14.12□□□□□ -0.15
VPS54-201ENST00000272322 KIAA1324LA8MWY0 1029 aaPredicted RBP14.11□□□□□ -0.15
VPS54-201ENST00000272322 AVPI1Q5T686 147 aa14.11□□□□□ -0.15
VPS54-201ENST00000272322 FER1L6-AS2Q96M78 137 aa14.11□□□□□ -0.15
VPS54-201ENST00000272322 TLN1Q9Y490 2541 aaKnown RBP14.11□□□□□ -0.15
VPS54-201ENST00000272322 GAPDHP04406 335 aaKnown RBP14.11□□□□□ -0.15
VPS54-201ENST00000272322 PPP1CBP62140 327 aa14.11□□□□□ -0.15
VPS54-201ENST00000272322 IL13RA2Q14627 380 aa14.11□□□□□ -0.15
VPS54-201ENST00000272322 DEFA4P12838 97 aa14.11□□□□□ -0.15
VPS54-201ENST00000272322 VDAC1P21796 283 aa14.11□□□□□ -0.15
VPS54-201ENST00000272322 F2RP25116 425 aa14.11□□□□□ -0.15
VPS54-201ENST00000272322 RAB13P51153 203 aa14.11□□□□□ -0.15
VPS54-201ENST00000272322 TRIP6Q15654 476 aaKnown RBP14.11□□□□□ -0.15
VPS54-201ENST00000272322 DHRS7BQ6IAN0 325 aaPredicted RBP14.11□□□□□ -0.15
VPS54-201ENST00000272322 PRELID3BQ9Y3B1 194 aa14.11□□□□□ -0.15
VPS54-201ENST00000272322 ZGRF1Q86YA3 2104 aa14.1□□□□□ -0.15
VPS54-201ENST00000272322 A0A1W2PPE3 182 aa14.1□□□□□ -0.15
VPS54-201ENST00000272322 CDS2O95674 445 aa14.1□□□□□ -0.15
VPS54-201ENST00000272322 H2AFB1P0C5Y9 115 aa14.1□□□□□ -0.15
VPS54-201ENST00000272322 BMP5P22003 454 aa14.1□□□□□ -0.15
VPS54-201ENST00000272322 GABRA2P47869 451 aa14.1□□□□□ -0.15
VPS54-201ENST00000272322 OR3A1P47881 315 aa14.1□□□□□ -0.15
VPS54-201ENST00000272322 FOXF2Q12947 444 aa14.1□□□□□ -0.15
VPS54-201ENST00000272322 OR1L1Q8NH94 360 aa14.1□□□□□ -0.15
VPS54-201ENST00000272322 IER2Q9BTL4 223 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms