RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 SPSB4Q96A44 273 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 CHD5Q8TDI0 1954 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 TMPRSS3P57727 454 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 ATP5L2Q7Z4Y8 100 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 HCFC2Q9Y5Z7 792 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 A0A1W2PS18 150 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 FAM221AA4D161 298 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 SYT8Q8NBV8 401 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 MS4A4AQ96JQ5 239 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 MRM2Q9UI43 246 aaKnown RBP4.34□□□□□ -1.71
HMCN1-201ENST00000271588 LY96Q9Y6Y9 160 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 C21orf140B9A014 251 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 LMX1BO60663 402 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 ID1P41134 155 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 SRSF5Q13243 272 aaKnown RBP4.34□□□□□ -1.71
HMCN1-201ENST00000271588 GPBAR1Q8TDU6 330 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 ASB10Q8WXI3 467 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 PARD6GQ9BYG4 376 aaPredicted RBP4.34□□□□□ -1.71
HMCN1-201ENST00000271588 LIMS1P48059 325 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 PRICKLE4Q2TBC4 344 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 S100A7L2Q5SY68 101 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 OR9G4Q8NGQ1 327 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 GPR82Q96P67 336 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 RNF122Q9H9V4 155 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 MCM3APO60318 1980 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 ERGP11308 486 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 OR1D5P58170 312 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 KISS1RQ969F8 398 aaPredicted RBP4.34□□□□□ -1.71
HMCN1-201ENST00000271588 RARRES2Q99969 163 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 COA4Q9NYJ1 87 aa4.34□□□□□ -1.71
HMCN1-201ENST00000271588 SBF2Q86WG5 1849 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 RAB29O14966 203 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 LEPROTL1O95214 131 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 RHOGP84095 191 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 FAM27BQ5VT28 67 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 C1orf53Q5VUE5 145 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 TPSD1Q9BZJ3 242 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 NKG7Q16617 165 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 DEFB133Q30KQ1 61 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 PRSS36Q5K4E3 855 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 TMEM136Q6ZRR5 245 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 TRBV5-7A0A0A0MS05 114 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 ONECUT2O95948 504 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 AQP3Q92482 292 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 DNAJA3Q96EY1 480 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 CCL27Q9Y4X3 112 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 LIPGQ9Y5X9 500 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 LPAR6P43657 344 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 GZMMP51124 257 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 SRSF4Q08170 494 aaKnown RBP4.34□□□□□ -1.72
HMCN1-201ENST00000271588 VSTM2LQ96N03 204 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 ALPK2Q86TB3 2170 aa4.34□□□□□ -1.72
HMCN1-201ENST00000271588 NRG2O14511 850 aaPredicted RBP4.33□□□□□ -1.72
HMCN1-201ENST00000271588 RCC1P18754 421 aaPredicted RBP4.33□□□□□ -1.72
HMCN1-201ENST00000271588 MEF2CQ06413 473 aaPredicted RBP4.33□□□□□ -1.72
HMCN1-201ENST00000271588 HMGN2P46Q86SG4 172 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 TBX15Q96SF7 602 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 A0A1W2PQM1 296 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 SNURFLB1AK76 121 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 FCMRO60667 390 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 STARD6P59095 220 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 SRSF9Q13242 221 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMCN1-201ENST00000271588 ZNF519Q8TB69 540 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 Q8WTZ3 238 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 ZMAT3Q9HA38 289 aaKnown RBP4.33□□□□□ -1.72
HMCN1-201ENST00000271588 FGF22Q9HCT0 170 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 A0A1W2PNV4 684 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 TNFSF15O95150 251 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 PRSS1P07477 247 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 MS4A6AQ9H2W1 248 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 DUSP13Q9UII6 198 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 LINC01553A4QN01 128 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 ICOSLGO75144 302 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 SQSTM1Q13501 440 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 LRTM2Q8N967 370 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 OR11H7Q8NGC8 314 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 PLPPR1Q8TBJ4 325 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 R3HDM4Q96D70 268 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 GNRHR2Q96P88 292 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 H7C1H1 209 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 UBE2CO00762 179 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 CA2P00918 260 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 GYPAP02724 150 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 CBLN2Q8IUK8 224 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 SPTY2D1-AS1A0A0U1RR47 76 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 CST7O76096 145 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 C10orf113Q5VZT2 155 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 COL11A1P12107 1806 aaPredicted RBP4.33□□□□□ -1.72
HMCN1-201ENST00000271588 GOSR1O95249 250 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 RECKO95980 971 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 DYNLT3P51808 116 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 ACSM6Q6P461 480 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 CNTD2Q9H8S5 307 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 ZFP64Q9NPA5 681 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 PSMB2P49721 201 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 UCP2P55851 309 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 MEX3DQ86XN8 651 aaKnown RBP4.33□□□□□ -1.72
HMCN1-201ENST00000271588 UBE2FQ969M7 185 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 TRBV24-1A0A075B6N3 115 aa4.33□□□□□ -1.72
HMCN1-201ENST00000271588 NEURL1O76050 574 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 1276.6 ms