RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 IAPPP10997 89 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 CA6P23280 308 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 WNT5AP41221 380 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 S100A12P80511 92 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 OR2B11Q5JQS5 317 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 TMPRSS7Q7RTY8 843 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 DPPA2Q7Z7J5 298 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 CXorf67Q86X51 503 aaPredicted RBP16.23■□□□□ 0.19
CPNE7-201ENST00000268720 ODF3L1Q8IXM7 274 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 TMEM222Q9H0R3 208 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 TRBV23-1A0A0A0MS06 115 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 H0YL77 283 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 SS18L1O75177 396 aaPredicted RBP16.23■□□□□ 0.19
CPNE7-201ENST00000268720 IL18BPO95998 194 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 CADP27708 2225 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 RELNP78509 3460 aa16.23■□□□□ 0.19
CPNE7-201ENST00000268720 RBFOX3A6NFN3 312 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 CD300LBA8K4G0 201 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 CHST1O43916 411 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 SMIM6P0DI80 62 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 SPSB3Q6PJ21 355 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 MCEMP1Q8IX19 187 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 SELENOHQ8IZQ5 122 aaKnown RBP16.22■□□□□ 0.19
CPNE7-201ENST00000268720 TMEM252Q8N6L7 170 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 ROS1P08922 2347 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 USF3Q68DE3 2245 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 YIF1AO95070 293 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 IGHV2-5P01817 119 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 CELA3BP08861 270 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 HOXB1P14653 301 aaPredicted RBP16.22■□□□□ 0.19
CPNE7-201ENST00000268720 RPS10P46783 165 aaKnown RBP16.22■□□□□ 0.19
CPNE7-201ENST00000268720 FGF12P61328 243 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 RND3P61587 244 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 SLC10A1Q14973 349 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 ALKBH2Q6NS38 261 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 C11orf1Q9H5F2 150 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 TUBA4BQ9H853 241 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 MIOXQ9UGB7 285 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 PPP1R3CQ9UQK1 317 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 RAB5CP51148 216 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 UCP3P55916 312 aa16.22■□□□□ 0.19
CPNE7-201ENST00000268720 SEBOXQ9HB31 216 aaPredicted RBP16.22■□□□□ 0.19
CPNE7-201ENST00000268720 METTL1Q9UBP6 276 aaKnown RBP16.22■□□□□ 0.19
CPNE7-201ENST00000268720 KLF13Q9Y2Y9 288 aaPredicted RBP16.22■□□□□ 0.19
CPNE7-201ENST00000268720 KLRC4-KLRK1H3BQV0 150 aa16.21■□□□□ 0.19
CPNE7-201ENST00000268720 SIRPB1O00241 398 aa16.21■□□□□ 0.19
CPNE7-201ENST00000268720 TK1P04183 234 aa16.21■□□□□ 0.19
CPNE7-201ENST00000268720 S100A8P05109 93 aa16.21■□□□□ 0.19
CPNE7-201ENST00000268720 FGF8P55075 233 aaPredicted RBP16.21■□□□□ 0.19
CPNE7-201ENST00000268720 VAMP2P63027 116 aa16.21■□□□□ 0.19
CPNE7-201ENST00000268720 RHEBQ15382 184 aa16.21■□□□□ 0.19
CPNE7-201ENST00000268720 ALKBH6Q3KRA9 238 aa16.21■□□□□ 0.19
CPNE7-201ENST00000268720 ZNF251Q9BRH9 671 aa16.21■□□□□ 0.19
CPNE7-201ENST00000268720 SPRR3Q9UBC9 169 aa16.21■□□□□ 0.19
CPNE7-201ENST00000268720 HMGB3O15347 200 aaKnown RBP16.21■□□□□ 0.18
CPNE7-201ENST00000268720 NAPSAO96009 420 aa16.21■□□□□ 0.18
CPNE7-201ENST00000268720 COX5BP10606 129 aa16.21■□□□□ 0.18
CPNE7-201ENST00000268720 PSG2P11465 335 aa16.21■□□□□ 0.18
CPNE7-201ENST00000268720 CHD3Q12873 2000 aaKnown RBP16.21■□□□□ 0.18
CPNE7-201ENST00000268720 PLPPR2Q96GM1 343 aa16.21■□□□□ 0.18
CPNE7-201ENST00000268720 RSG1Q9BU20 258 aa16.21■□□□□ 0.18
CPNE7-201ENST00000268720 ERRFI1Q9UJM3 462 aaPredicted RBP16.21■□□□□ 0.18
CPNE7-201ENST00000268720 H3BQ15 152 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 LINC00205P59089 165 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 PMP22Q01453 160 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 RNPS1Q15287 305 aaKnown RBP16.2■□□□□ 0.18
CPNE7-201ENST00000268720 Q6ZRM9 215 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 GCNT2Q8N0V5 402 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 RNASE11Q8TAA1 199 aaKnown RBP16.2■□□□□ 0.18
CPNE7-201ENST00000268720 RAB39BQ96DA2 213 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 VSIRQ9H7M9 311 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 TNRC6AQ8NDV7 1962 aaKnown RBP16.2■□□□□ 0.18
CPNE7-201ENST00000268720 TRAPPC2LH3BP13 241 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 ARR3P36575 388 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 PLP2Q04941 152 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 LOXL4Q96JB6 756 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 PLEKHF2Q9H8W4 249 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 Q9N2K0 584 aa16.2■□□□□ 0.18
CPNE7-201ENST00000268720 AP4M1O00189 453 aa16.19■□□□□ 0.18
CPNE7-201ENST00000268720 CLN3Q13286 438 aa16.19■□□□□ 0.18
CPNE7-201ENST00000268720 WDYHV1Q96HA8 205 aa16.19■□□□□ 0.18
CPNE7-201ENST00000268720 FER1L6-AS2Q96M78 137 aa16.19■□□□□ 0.18
CPNE7-201ENST00000268720 RNF150Q9ULK6 438 aa16.19■□□□□ 0.18
CPNE7-201ENST00000268720 MDKP21741 143 aaPredicted RBP16.19■□□□□ 0.18
CPNE7-201ENST00000268720 TAGLN2P37802 199 aaKnown RBP16.19■□□□□ 0.18
CPNE7-201ENST00000268720 SRSF6Q13247 344 aaKnown RBP16.19■□□□□ 0.18
CPNE7-201ENST00000268720 ZNF266Q14584 549 aa16.19■□□□□ 0.18
CPNE7-201ENST00000268720 PDZD11Q5EBL8 140 aa16.19■□□□□ 0.18
CPNE7-201ENST00000268720 CYB561D1Q8N8Q1 229 aa16.19■□□□□ 0.18
CPNE7-201ENST00000268720 OR5P3Q8WZ94 311 aa16.19■□□□□ 0.18
CPNE7-201ENST00000268720 CDS2O95674 445 aa16.18■□□□□ 0.18
CPNE7-201ENST00000268720 FAM209BQ5JX69 171 aa16.18■□□□□ 0.18
CPNE7-201ENST00000268720 LYRM2Q9NU23 88 aaPredicted RBP16.18■□□□□ 0.18
CPNE7-201ENST00000268720 KCNS2Q9ULS6 477 aa16.18■□□□□ 0.18
CPNE7-201ENST00000268720 FZR1Q9UM11 496 aa16.18■□□□□ 0.18
CPNE7-201ENST00000268720 RBM7Q9Y580 266 aaKnown RBP16.18■□□□□ 0.18
CPNE7-201ENST00000268720 CSMD1Q96PZ7 3565 aa16.18■□□□□ 0.18
CPNE7-201ENST00000268720 PITX3O75364 302 aa16.18■□□□□ 0.18
CPNE7-201ENST00000268720 CXCL1P09341 107 aa16.18■□□□□ 0.18
CPNE7-201ENST00000268720 PMELP40967 661 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms