RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 MRGPRGQ86SM5 289 aa10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF519Q8TB69 540 aa10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 IMMP1LQ96LU5 166 aa10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 NUDT16L1Q9BRJ7 211 aaKnown RBP10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 NOTCH3Q9UM47 2321 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 HTTP42858 3142 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 C20orf202A1L168 122 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 CRYM-AS1A6NIL9 109 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 PITX3O75364 302 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 TRGC1P0CF51 173 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 IL11P20809 199 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 LSM6P62312 80 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 TMEM183BQ1AE95 376 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 FNDC7Q5VTL7 733 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 ZNF774Q6NX45 483 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 ZDHHC23Q8IYP9 409 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 BMPERQ8N8U9 685 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 OR11L1Q8NGX0 322 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 CIB3Q96Q77 187 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 CLDN16Q9Y5I7 305 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 FREM3P0C091 2139 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 TNFSF11O14788 317 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 CYB5R3P00387 301 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 OR1C1Q15619 314 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 CEACAM16Q2WEN9 425 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 PLPPR5Q32ZL2 321 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 OR2V1Q8NHB1 315 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 DYRK2Q92630 601 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 TECTBQ96PL2 329 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 FAM234AQ9H0X4 552 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 FAM206AQ9NX38 181 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 LHX6Q9UPM6 363 aa10.02□□□□□ -0.81
CLSTN3-201ENST00000266546 MEX3AA1L020 520 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 ZNF732B4DXR9 585 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 TRDCB7Z8K6 153 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 SYNGR2O43760 224 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 KRASP01116 189 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 LIFP15018 202 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 FFAR4Q5NUL3 377 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 GAPTQ8N292 157 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 TMEM68Q96MH6 324 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 ZNF331Q9NQX6 463 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 PTPN13Q12923 2485 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 C5orf49A4QMS7 147 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 SIRPB1O00241 398 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 DVL1O14640 695 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 BCL2P10415 239 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 SLC25A6P12236 298 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 MMP9P14780 707 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 HOXA5P20719 270 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 GABRA2P47869 451 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 DCAF10Q5QP82 559 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 PLA2G2CQ5R387 149 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 H1FOOQ8IZA3 346 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 NEIL1Q96FI4 390 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 KCNK17Q96T54 332 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 IL17BQ9UHF5 180 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 ZNF391Q9UJN7 358 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 GPM6AP51674 278 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 PPP1R32Q7Z5V6 425 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 ZNF573Q86YE8 665 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 KLHDC1Q8N7A1 406 aa10.01□□□□□ -0.81
CLSTN3-201ENST00000266546 CLPSP04118 112 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 FCGR3AP08637 254 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 RNF224P0DH78 156 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 GCH1P30793 250 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 SUCLG1P53597 346 aaKnown RBP10□□□□□ -0.81
CLSTN3-201ENST00000266546 FOXO1Q12778 655 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 PIGYQ3MUY2 71 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 PRAMEF5Q5TYX0 476 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 PRAMEF6Q5VXH4 476 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 C10orf35Q96D05 121 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 MSI2Q96DH6 328 aaKnown RBP10□□□□□ -0.81
CLSTN3-201ENST00000266546 FOXB1Q99853 325 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 A0A096LPE4 126 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 A0A1W2PPZ6 126 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 M0QZK8 103 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 GGCTO75223 188 aaKnown RBP10□□□□□ -0.81
CLSTN3-201ENST00000266546 CCL3P10147 92 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 ZNF32P17041 273 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 RPS16P62249 146 aaKnown RBP10□□□□□ -0.81
CLSTN3-201ENST00000266546 TIGITQ495A1 244 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 LURAP1LQ8IV03 231 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 KDF1Q8NAX2 398 aaPredicted RBP10□□□□□ -0.81
CLSTN3-201ENST00000266546 OR10G4Q8NGN3 311 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 OR10G9Q8NGN4 311 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 OR10G7Q8NGN6 311 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 UBALD1Q8TB05 177 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 ABHD5Q8WTS1 349 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 VPS25Q9BRG1 176 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 SLC7A10Q9NS82 523 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 NPIPB13A6NJU9 1138 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 NPIPB4C9JG80 1138 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 SLC31A2O15432 143 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 FOLR2P14207 255 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 CSRP1P21291 193 aaKnown RBP10□□□□□ -0.81
CLSTN3-201ENST00000266546 HNRNPA3P51991 378 aaKnown RBP10□□□□□ -0.81
CLSTN3-201ENST00000266546 TMEM50BP56557 158 aa10□□□□□ -0.81
CLSTN3-201ENST00000266546 PLAC9Q5JTB6 97 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms