RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 TEX29Q8N6K0 151 aa14.66□□□□□ -0.06
CROCCP3-201ENST00000263511 DYRK2Q92630 601 aa14.66□□□□□ -0.06
CROCCP3-201ENST00000263511 NXF2Q9GZY0 626 aaKnown RBP14.66□□□□□ -0.06
CROCCP3-201ENST00000263511 LIPGQ9Y5X9 500 aa14.66□□□□□ -0.06
CROCCP3-201ENST00000263511 V9GYH0 126 aa14.66□□□□□ -0.06
CROCCP3-201ENST00000263511 ADAMTSL1Q8N6G6 1762 aa14.66□□□□□ -0.06
CROCCP3-201ENST00000263511 KIAA1217Q5T5P2 1943 aa14.66□□□□□ -0.06
CROCCP3-201ENST00000263511 NKX2-6A6NCS4 301 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 IL11P20809 199 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 OR2V2Q96R30 315 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 SEC11CQ9BY50 192 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 REG1BP48304 166 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 VAMP3Q15836 100 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 BSXQ3C1V8 233 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 ARID1AO14497 2285 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 ARG1P05089 322 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 IFI6P09912 130 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 PSG2P11465 335 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 TMEM91Q6ZNR0 172 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 FAM210BQ96KR6 192 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 VPS25Q9BRG1 176 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 CISD1Q9NZ45 108 aaKnown RBP14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 TRIP12Q14669 1992 aaPredicted RBP14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 A0A1W2PNV4 684 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 IGSF23A1L1A6 192 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 KIR3DL2P43630 455 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 TGIF1Q15583 401 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 LYZL2Q7Z4W2 148 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 TRAF4Q9BUZ4 470 aaPredicted RBP14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 MIXL1Q9H2W2 232 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 IFNL4K9M1U5 179 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 CD1AP06126 327 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 FAM87AP0C7U9 286 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 B2MP61769 119 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 TEPPQ6URK8 271 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 SEZ6L2Q6UXD5 910 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 TOMM20LQ6UXN7 152 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 KLHDC2Q9Y2U9 406 aa14.65□□□□□ -0.06
CROCCP3-201ENST00000263511 A0A1W2PPE3 182 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 PGA4P0DJD7 388 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 HIST1H1EP10412 219 aaKnown RBP14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 HNRNPA3P51991 378 aaKnown RBP14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 FAM181AQ8N9Y4 354 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 PCM1Q15154 2024 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 TRBV23-1A0A0A0MS06 115 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 LINC00052Q96N35 136 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 ZMAT5Q9UDW3 170 aaKnown RBP14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 OR51B2Q9Y5P1 312 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 COL4A5P29400 1685 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 P01737 135 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 GAPDHP04406 335 aaKnown RBP14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 ID1P41134 155 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 ZNF658BQ4V348 819 aaPredicted RBP14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 IGSF11Q5DX21 431 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 SCN3AQ9NY46 2000 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 ZNF638Q14966 1978 aaKnown RBP14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 HPRT1P00492 218 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 SCGB1C2P0DMR2 95 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 COL8A1P27658 744 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 EWSR1Q01844 656 aaKnown RBP eCLIP14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 FAM209AQ5JX71 171 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 GCSAMQ8N6F7 178 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 FAM222BQ8WU58 562 aa14.64□□□□□ -0.07
CROCCP3-201ENST00000263511 APELAP0DMC3 54 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 HTN1P15515 57 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 ZNF250P15622 560 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 TMEM50BP56557 158 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 FGF12P61328 243 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 OR10G8Q8NGN5 311 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 ZDHHC8Q9ULC8 765 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 STRCP1A6NGW2 1772 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 NANOS3P60323 173 aaKnown RBP14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 TUSC1Q2TAM9 212 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 COX19Q49B96 90 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 HSD17B13Q7Z5P4 300 aaPredicted RBP14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 KLF9Q13886 244 aaPredicted RBP14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 IQCJQ1A5X6 159 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 ITLN1Q8WWA0 313 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 A0A1W2PQM1 296 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 USF1P22415 310 aaPredicted RBP14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 CCKARP32238 428 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 EFNB2P52799 333 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 GPX7Q96SL4 187 aaPredicted RBP14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 HDHD3Q9BSH5 251 aaPredicted RBP14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 PARD6AQ9NPB6 346 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 PRSS50Q9UI38 385 aa14.63□□□□□ -0.07
CROCCP3-201ENST00000263511 FCGR3AP08637 254 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 MC5RP33032 325 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 KHDC3LQ587J8 217 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 SLC35E3Q7Z769 313 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 FAM24BQ8N5W8 94 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 COX6A1P12074 109 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 FSTP19883 344 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 TMEM97Q5BJF2 176 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 SLC25A47Q6Q0C1 308 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 WASHC3Q9Y3C0 194 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 QSER1Q2KHR3 1735 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 J3KRW8 73 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 NDUFA2O43678 99 aa14.62□□□□□ -0.07
CROCCP3-201ENST00000263511 FAM157CP0CG43 387 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms