RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 DUSP23Q9BVJ7 150 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 WDR54Q9H977 334 aa14.09□□□□□ -0.15
ZNF541-201ENST00000263351 KIAA1324LA8MWY0 1029 aaPredicted RBP14.08□□□□□ -0.16
ZNF541-201ENST00000263351 C9J4A7 227 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 UCP1P25874 307 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 SRD5A2P31213 254 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 ABLIM2Q6H8Q1 611 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 PPP1R32Q7Z5V6 425 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 RNASE11Q8TAA1 199 aaKnown RBP14.08□□□□□ -0.16
ZNF541-201ENST00000263351 MRPL30Q8TCC3 161 aaKnown RBP14.08□□□□□ -0.16
ZNF541-201ENST00000263351 SF3B5Q9BWJ5 86 aaKnown RBP14.08□□□□□ -0.16
ZNF541-201ENST00000263351 C1QTNF5Q9BXJ0 243 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 PRO1933Q9H354 126 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 CACNG5Q9UF02 275 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 NOSIPQ9Y314 301 aaKnown RBP14.08□□□□□ -0.16
ZNF541-201ENST00000263351 TRAV24A0A0B4J272 114 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 VDAC1P21796 283 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 BMP5P22003 454 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 FAM90A2PQ658T7 463 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 TDHQ8IZJ6 230 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 ZNF610Q8N9Z0 462 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 LFNGQ8NES3 379 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 PLA2G3Q9NZ20 509 aa14.08□□□□□ -0.16
ZNF541-201ENST00000263351 TRGC1P0CF51 173 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 S100PP25815 95 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 FOLR3P41439 243 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 LINC00205P59089 165 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 RAB2AP61019 212 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 KHDC3LQ587J8 217 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 ZDHHC23Q8IYP9 409 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 CCDC54Q8NEL0 328 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 NIPSNAP3BQ9BS92 247 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 TUSC2O75896 110 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 IGLV2-14P01704 120 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 FGF12P61328 243 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 ZFP36L1Q07352 338 aaKnown RBP14.07□□□□□ -0.16
ZNF541-201ENST00000263351 MRPL21Q7Z2W9 205 aaKnown RBP14.07□□□□□ -0.16
ZNF541-201ENST00000263351 M1APQ8TC57 530 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 GATAD1Q8WUU5 269 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 PFDN5Q99471 154 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 ATP5SQ99766 215 aa14.07□□□□□ -0.16
ZNF541-201ENST00000263351 REPIN1Q9BWE0 567 aaKnown RBP14.07□□□□□ -0.16
ZNF541-201ENST00000263351 IFNL4K9M1U5 179 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 HSPA12AO43301 675 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 MRPL33O75394 65 aaKnown RBP14.06□□□□□ -0.16
ZNF541-201ENST00000263351 PGA5P0DJD9 388 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 FABP4P15090 132 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 F2RP25116 425 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 CD200P41217 278 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 CDX1P47902 265 aaPredicted RBP14.06□□□□□ -0.16
ZNF541-201ENST00000263351 CEBPDP49716 269 aaPredicted RBP14.06□□□□□ -0.16
ZNF541-201ENST00000263351 ZXDAP98168 799 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 ZNF506Q5JVG8 444 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 TIPARPQ7Z3E1 657 aaKnown RBP14.06□□□□□ -0.16
ZNF541-201ENST00000263351 TVP23CQ96ET8 276 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 SNX22Q96L94 193 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 SLC25A31Q9H0C2 315 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 RAB1AP62820 205 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 PRSS8Q16651 343 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 WDR5BQ86VZ2 330 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 SGCZQ96LD1 299 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 PLSCR2Q9NRY7 297 aa14.06□□□□□ -0.16
ZNF541-201ENST00000263351 TRAPPC2LH3BP13 241 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 SIRPB1O00241 398 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 IGKV1D-33P01593 117 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 IGKV1-33P01594 117 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 IGKV1-5P01602 117 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 CA6P23280 308 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 TAS2R30P59541 319 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 GAMTQ14353 236 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 SPINK9Q5DT21 86 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 OR2T2Q6IF00 324 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 KDF1Q8NAX2 398 aaPredicted RBP14.05□□□□□ -0.16
ZNF541-201ENST00000263351 HLA-CQ95604 372 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 SPSB4Q96A44 273 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 C12orf49Q9H741 205 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 LOC102723971A0A1B0GUV8 181 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 A0A1B0GW64 132 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 WDR1O75083 606 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 MAS1LP35410 378 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 RTP5Q14D33 572 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 ZNF324BQ6AW86 544 aaPredicted RBP14.05□□□□□ -0.16
ZNF541-201ENST00000263351 PLK3Q9H4B4 646 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 RNF150Q9ULK6 438 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 ATP23Q9Y6H3 246 aa14.05□□□□□ -0.16
ZNF541-201ENST00000263351 GJE1A6NN92 205 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 GLIPR1P48060 266 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 HLA-DRB3P79483 266 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 FOXO1Q12778 655 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 IL11RAQ14626 422 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 SPANXN5Q5MJ07 72 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 ZNF787Q6DD87 383 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 C1QL4Q86Z23 238 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 PSMF1Q92530 271 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 SPIN2AQ99865 258 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 SPIN2BQ9BPZ2 258 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 PRDM13Q9H4Q3 707 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 GAR1Q9NY12 217 aaKnown RBP14.04□□□□□ -0.16
ZNF541-201ENST00000263351 PILRBQ9UKJ0 227 aa14.04□□□□□ -0.16
ZNF541-201ENST00000263351 KCNS2Q9ULS6 477 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms