RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ZNF251Q9BRH9 671 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 SLC25A31Q9H0C2 315 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 PLK3Q9H4B4 646 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 OR14J1Q9UGF5 321 aa7.79□□□□□ -1.16
MSH4-201ENST00000263187 PITX3O75364 302 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 TUBG1P23258 451 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 RHEBQ15382 184 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 CT55Q8WUE5 264 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 ADGRG7Q96K78 797 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 NIPSNAP3BQ9BS92 247 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 GGACTQ9BVM4 153 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 RPRMQ9NS64 109 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 DOK5Q9P104 306 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 CADP27708 2225 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 IFITM10A6NMD0 228 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 KIAA1324LA8MWY0 1029 aaPredicted RBP7.78□□□□□ -1.16
MSH4-201ENST00000263187 IGHV2-5P01817 119 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 VDAC1P21796 283 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 RAB5CP51148 216 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 ERVS71-1P61550 626 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 RNF212Q495C1 297 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 NMSQ5H8A3 153 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 HEPN1Q6WQI6 88 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 NUFIP2Q7Z417 695 aaKnown RBP7.78□□□□□ -1.16
MSH4-201ENST00000263187 ZNF808Q8N4W9 903 aaPredicted RBP7.78□□□□□ -1.16
MSH4-201ENST00000263187 OR10D4PQ8NGN7 298 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 MUCL1Q96DR8 90 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 C1QTNF5Q9BXJ0 243 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 GPR61Q9BZJ8 451 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 PRSS50Q9UI38 385 aa7.78□□□□□ -1.16
MSH4-201ENST00000263187 TRAV24A0A0B4J272 114 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 CD300LBA8K4G0 201 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 NDUFS6O75380 124 aaKnown RBP7.77□□□□□ -1.16
MSH4-201ENST00000263187 SMIM6P0DI80 62 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 FGF12P61328 243 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 ELOBQ15370 118 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 TESK1Q15569 626 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 WDR25Q64LD2 544 aaPredicted RBP7.77□□□□□ -1.16
MSH4-201ENST00000263187 Q6ZSR3 168 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 STX12Q86Y82 276 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 KCNE4Q8WWG9 221 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 CLDN23Q96B33 292 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 RHOVQ96L33 236 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 SPIN2AQ99865 258 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 SPIN2BQ9BPZ2 258 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 REPIN1Q9BWE0 567 aaKnown RBP7.77□□□□□ -1.16
MSH4-201ENST00000263187 TOLLIPQ9H0E2 274 aa7.77□□□□□ -1.16
MSH4-201ENST00000263187 METTL1Q9UBP6 276 aaKnown RBP7.77□□□□□ -1.16
MSH4-201ENST00000263187 CEBPZOSA8MTT3 80 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 NAPSAO96009 420 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 S100A8P05109 93 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 GRPP07492 148 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 CD55P08174 381 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 UCP3P55916 312 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 PLGLB1Q02325 96 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 LTC4SQ16873 150 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 COMMD1Q8N668 190 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 TMEM56Q96MV1 263 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 TAAR9Q96RI9 348 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 DEFB127Q9H1M4 99 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 AURKAIP1Q9NWT8 199 aaPredicted RBP7.77□□□□□ -1.17
MSH4-201ENST00000263187 TMEM56-RWDD3S4R434 201 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 IFNA5P01569 189 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 IGHV3-13P01766 116 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 IGHV3-7P01780 117 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 CELA3BP08861 270 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 F2RP25116 425 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 UCP2P55851 309 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 ID3Q02535 119 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 CEACAM21Q3KPI0 293 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 ALKBH6Q3KRA9 238 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 PYY3Q5JQD4 70 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 ABLIM2Q6H8Q1 611 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 PCSK4Q6UW60 755 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 LILRB2Q8N423 598 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 CLDND2Q8NHS1 167 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 MRPL30Q8TCC3 161 aaKnown RBP7.77□□□□□ -1.17
MSH4-201ENST00000263187 C11orf1Q9H5F2 150 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 TRAPPC2LQ9UL33 140 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 LOXL2Q9Y4K0 774 aa7.77□□□□□ -1.17
MSH4-201ENST00000263187 DEGS1O15121 323 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 SOX15O60248 233 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 CYTIPO60759 359 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 CD200P41217 278 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 RAB2AP61019 212 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 FOXO1Q12778 655 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 DCAF12Q5T6F0 453 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 ATP1A1-AS1Q5TC04 95 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 ZNF295-AS1Q8N0V1 137 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 TPRX1Q8N7U7 411 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 SCGB1C1Q8TD33 95 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 ATP5SQ99766 215 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 PRO1933Q9H354 126 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 SEBOXQ9HB31 216 aaPredicted RBP7.76□□□□□ -1.17
MSH4-201ENST00000263187 FZR1Q9UM11 496 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 ATP23Q9Y6H3 246 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 TTC28Q96AY4 2481 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 UBE2L5PA0A1B0GUS4 154 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 PPIHO43447 177 aaKnown RBP7.76□□□□□ -1.17
MSH4-201ENST00000263187 RBMXL2O75526 392 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms