RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 GLB1P16278 677 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 FUT6P51993 359 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 BAXQ07812 192 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 PMS2P11Q13670 270 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 FIP1L1Q6UN15 594 aaKnown RBP13.61□□□□□ -0.23
LMNB1-201ENST00000261366 OR1P1Q8NH06 330 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 C10orf35Q96D05 121 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 FUT9Q9Y231 359 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 MAP1LC3B2A6NCE7 125 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 A8MWP6 167 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 PGLYRP1O75594 196 aaPredicted RBP13.61□□□□□ -0.23
LMNB1-201ENST00000261366 NXPH1P58417 271 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 HIST1H3AP68431 136 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 JOSD1Q15040 202 aaPredicted RBP13.61□□□□□ -0.23
LMNB1-201ENST00000261366 CEACAM16Q2WEN9 425 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 MRPL41Q8IXM3 137 aaKnown RBP13.61□□□□□ -0.23
LMNB1-201ENST00000261366 ZNF295-AS1Q8N0V1 137 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 MAP1LC3BQ9GZQ8 125 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 OR51B6Q9H340 312 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 PPP1R3CQ9UQK1 317 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 RBM7Q9Y580 266 aaKnown RBP13.61□□□□□ -0.23
LMNB1-201ENST00000261366 IGHV3-64DA0A0J9YX35 117 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 UBE2L5PA0A1B0GUS4 154 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 B4DEV8 164 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 OR4A8P0C604 315 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 C20orf204Q6ZNR8 217 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 H1FOOQ8IZA3 346 aaPredicted RBP13.61□□□□□ -0.23
LMNB1-201ENST00000261366 SLC25A22Q9H936 323 aa13.61□□□□□ -0.23
LMNB1-201ENST00000261366 ERRFI1Q9UJM3 462 aaPredicted RBP13.61□□□□□ -0.23
LMNB1-201ENST00000261366 CACNA1DQ01668 2161 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 A0A1B0GUS0 222 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 LRRC3CA6NJW4 275 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 TP53I11O14683 189 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 ZNF737O75373 536 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 OPN1MWP04001 364 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 OPN1MW2P0DN77 364 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 OPN1MW3P0DN78 364 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 MLF1P58340 268 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 EIF3IQ13347 325 aaKnown RBP13.6□□□□□ -0.23
LMNB1-201ENST00000261366 SP5Q6BEB4 398 aaPredicted RBP13.6□□□□□ -0.23
LMNB1-201ENST00000261366 FADS6Q8N9I5 356 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 CADM4Q8NFZ8 388 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 LHX4Q969G2 390 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 SGCZQ96LD1 299 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 DDA1Q9BW61 102 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 CISD1Q9NZ45 108 aaKnown RBP13.6□□□□□ -0.23
LMNB1-201ENST00000261366 A0A096LPE4 126 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 hCG_38984A0A1B0GV85 526 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 A0A1W2PPZ6 126 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 PPP5D1E7EU14 171 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 DFFBO76075 338 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 EDN3P14138 238 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 UCP1P25874 307 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 RND2P52198 227 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 FAM185AQ8N0U4 392 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 OR56B2PQ8NGI1 322 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 OR2V1Q8NHB1 315 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 CBLN4Q9NTU7 201 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 PSENENQ9NZ42 101 aa13.6□□□□□ -0.23
LMNB1-201ENST00000261366 MRPS17Q9Y2R5 130 aaKnown RBP13.6□□□□□ -0.23
LMNB1-201ENST00000261366 IGLV3-32A0A0A0MS00 114 aa13.59□□□□□ -0.23
LMNB1-201ENST00000261366 GALR1P47211 349 aa13.59□□□□□ -0.23
LMNB1-201ENST00000261366 ZDHHC23Q8IYP9 409 aa13.59□□□□□ -0.23
LMNB1-201ENST00000261366 PRSS50Q9UI38 385 aa13.59□□□□□ -0.23
LMNB1-201ENST00000261366 H7BYZ3 331 aa13.59□□□□□ -0.23
LMNB1-201ENST00000261366 ZIC3O60481 467 aa13.59□□□□□ -0.23
LMNB1-201ENST00000261366 MDH2P40926 338 aaKnown RBP13.59□□□□□ -0.23
LMNB1-201ENST00000261366 GNB2P62879 340 aa13.59□□□□□ -0.23
LMNB1-201ENST00000261366 PNRC1Q12796 327 aaPredicted RBP13.59□□□□□ -0.23
LMNB1-201ENST00000261366 WNT5BQ9H1J7 359 aa13.59□□□□□ -0.23
LMNB1-201ENST00000261366 TMEM38BQ9NVV0 291 aa13.59□□□□□ -0.23
LMNB1-201ENST00000261366 ZNF816-ZNF321PA0A0X1KG74 233 aa13.58□□□□□ -0.23
LMNB1-201ENST00000261366 CXCL13O43927 109 aa13.58□□□□□ -0.23
LMNB1-201ENST00000261366 IL18BPO95998 194 aa13.58□□□□□ -0.23
LMNB1-201ENST00000261366 CD33P20138 364 aa13.58□□□□□ -0.23
LMNB1-201ENST00000261366 AAED1Q7RTV5 226 aa13.58□□□□□ -0.23
LMNB1-201ENST00000261366 OR5R1Q8NH85 324 aa13.58□□□□□ -0.23
LMNB1-201ENST00000261366 RNF138Q8WVD3 245 aa13.58□□□□□ -0.23
LMNB1-201ENST00000261366 CDH20Q9HBT6 801 aa13.58□□□□□ -0.23
LMNB1-201ENST00000261366 SLC39A9Q9NUM3 307 aa13.58□□□□□ -0.23
LMNB1-201ENST00000261366 RARRES3Q9UL19 164 aa13.58□□□□□ -0.23
LMNB1-201ENST00000261366 KCNS2Q9ULS6 477 aa13.58□□□□□ -0.23
LMNB1-201ENST00000261366 TRBV24-1A0A075B6N3 115 aa13.58□□□□□ -0.24
LMNB1-201ENST00000261366 LOC102725191A0A1B0GVB3 256 aa13.58□□□□□ -0.24
LMNB1-201ENST00000261366 CEACAM1P13688 526 aa13.58□□□□□ -0.24
LMNB1-201ENST00000261366 EGR1P18146 543 aa13.58□□□□□ -0.24
LMNB1-201ENST00000261366 F2RP25116 425 aa13.58□□□□□ -0.24
LMNB1-201ENST00000261366 PMP22Q01453 160 aa13.58□□□□□ -0.24
LMNB1-201ENST00000261366 ASCL4Q6XD76 172 aa13.58□□□□□ -0.24
LMNB1-201ENST00000261366 OR5B12Q96R08 314 aa13.58□□□□□ -0.24
LMNB1-201ENST00000261366 FOXB1Q99853 325 aa13.58□□□□□ -0.24
LMNB1-201ENST00000261366 FSCN3Q9NQT6 498 aa13.58□□□□□ -0.24
LMNB1-201ENST00000261366 VAX2Q9UIW0 290 aa13.58□□□□□ -0.24
LMNB1-201ENST00000261366 CD300LBA8K4G0 201 aa13.57□□□□□ -0.24
LMNB1-201ENST00000261366 SCGB1D1O95968 90 aa13.57□□□□□ -0.24
LMNB1-201ENST00000261366 FAM3BP58499 235 aaPredicted RBP13.57□□□□□ -0.24
LMNB1-201ENST00000261366 BSXQ3C1V8 233 aa13.57□□□□□ -0.24
LMNB1-201ENST00000261366 GUSBP11Q6P575 273 aa13.57□□□□□ -0.24
LMNB1-201ENST00000261366 HAPLN4Q86UW8 402 aa13.57□□□□□ -0.24
LMNB1-201ENST00000261366 OR4C12Q96R67 309 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms